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                                  • MT-ND5
                                  BRAIN MEDULLA OBLONGATA Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  Brain proteome
                                  Medulla oblongata
                                  MEDULLA OBLONGATA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:35081.4 nTPM
                                  Pig:8527.4 nTPM
                                  Allen mouse:19.1 Expression energy

                                  MEDULLA OBLONGATA - Annotated protein expression
                                  Pending normal tissue analysis

                                  MEDULLA OBLONGATA - HPA Brain RNA-seq
                                  Max nTPM 35081.4
                                  Sample id Sample description nTPM
                                  Area postrema
                                  nTPM: 30564.4
                                  2306 Male, age 80, both hemispheres 37277.8
                                  2799 Male, age 61, both hemispheres 34735.6
                                  2054 Male, age 76, both hemispheres 19679.8
                                  Dorsal medullary reticular nucleus
                                  nTPM: 17791.3
                                  2373 Male, age 61, both hemispheres 22796.7
                                  2088 Male, age 76, both hemispheres 20315.8
                                  2040 Female, age 85, both hemispheres 10261.3
                                  Dorsal motor vagal complex
                                  nTPM: 29720.3
                                  2797 Male, age 61, both hemispheres 61347.4
                                  2807 Female, age 85, both hemispheres 48035.2
                                  2185 Male, age 76, both hemispheres 33660.4
                                  2643 Male, age 74, both hemispheres 27714.8
                                  2813 Female, age 72, unknown 24532.4
                                  2844 Male, age 55, unknown 17020.9
                                  2133 Female, age 91, both hemispheres 14415.1
                                  2000 Male, age 74, unknown 11036.2
                                  Gigantocellular reticular nuclei, medullary
                                  nTPM: 21472.8
                                  2387 Female, age 91, both hemispheres 33950.5
                                  2310 Male, age 80, both hemispheres 33943.0
                                  2314 Male, age 61, both hemispheres 27050.3
                                  2462 Male, age 74, both hemispheres 13969.9
                                  2022 Male, age 76, right hemisphere 12303.3
                                  1876 Female, age 85, both hemispheres 7619.7
                                  Gigantocellular reticular nuclei, pars
                                  nTPM: 32210.8
                                  2330 Male, age 80, both hemispheres 53764.5
                                  2706 Male, age 80, both hemispheres 49607.6
                                  2336 Male, age 61, both hemispheres 23529.3
                                  2168 Male, age 76, both hemispheres 17168.6
                                  2084 Female, age 85, both hemispheres 16984.3
                                  Inferior olive
                                  nTPM: 25533.6
                                  2628 Female, age 91, both hemispheres 51916.9
                                  2379 Male, age 80, both hemispheres 32942.6
                                  2178 Male, age 61, both hemispheres 16852.4
                                  2085 Female, age 85, both hemispheres 15519.3
                                  2563 Male, age 74, both hemispheres 10436.8
                                  Lateral medullary reticular nucleus
                                  nTPM: 17864.3
                                  2374 Male, age 61, both hemispheres 31227.2
                                  2804 Female, age 91, both hemispheres 28137.6
                                  2190 Female, age 85, both hemispheres 18534.1
                                  2044 Male, age 76, both hemispheres 14253.2
                                  2852 Male, age 80, both hemispheres 9583.5
                                  2305 Male, age 74, both hemispheres 5450.3
                                  Medial olivary nucleus
                                  nTPM: 13123.6
                                  2851 Male, age 80, both hemispheres 32070.3
                                  2138 Female, age 91, both hemispheres 8414.5
                                  1962 Male, age 76, both hemispheres 7490.3
                                  1943 Male, age 61, both hemispheres 4519.2
                                  Medial vestibular nucleus
                                  nTPM: 21431.0
                                  2624 Male, age 61, both hemispheres 40646.1
                                  2803 Female, age 91, both hemispheres 23582.0
                                  2134 Male, age 76, both hemispheres 23224.8
                                  2801 Male, age 74, both hemispheres 16509.0
                                  2093 Male, age 80, both hemispheres 15140.2
                                  2743 Female, age 85, both hemispheres 9484.1
                                  Motor hypoglossal nucleus
                                  nTPM: 23113.2
                                  2461 Male, age 61, both hemispheres 47358.9
                                  2132 Female, age 85, both hemispheres 24778.1
                                  2182 Male, age 80, both hemispheres 23509.3
                                  2125 Female, age 91, both hemispheres 11644.7
                                  2277 Male, age 76, both hemispheres 8275.3
                                  Nucleus ambiguus
                                  nTPM: 6880.4
                                  2096 Female, age 85, both hemispheres 7020.7
                                  2071 Male, age 76, both hemispheres 6740.1
                                  Nucleus cuneatus
                                  nTPM: 35081.4
                                  2805 Female, age 91, both hemispheres 70147.6
                                  2381 Male, age 80, both hemispheres 42304.6
                                  2808 Female, age 85, both hemispheres 40564.3
                                  2380 Male, age 80, both hemispheres 33055.7
                                  2131 Male, age 76, both hemispheres 31749.6
                                  2562 Male, age 61, both hemispheres 30009.2
                                  2100 Male, age 76, both hemispheres 27783.7
                                  2564 Male, age 74, both hemispheres 20377.4
                                  2376 Male, age 61, both hemispheres 19740.3
                                  Nucleus gracilis
                                  nTPM: 34069.6
                                  2299 Female, age 85, both hemispheres 42645.8
                                  2382 Male, age 80, both hemispheres 41452.6
                                  2627 Male, age 74, both hemispheres 18110.3
                                  Nucleus raphe obscurus
                                  nTPM: 12159.2
                                  2845 Female, age 85, midline 15511.0
                                  2800 Male, age 61, midline 14817.9
                                  2142 Male, age 76, midline 6148.7
                                  Nucleus raphe pallidus
                                  nTPM: 9359.1
                                  2183 Male, age 80, midline 15149.5
                                  2145 Male, age 76, midline 8587.0
                                  1924 Male, age 61, midline 4341.0
                                  Nucleus tractus solitarii
                                  nTPM: 21386.1
                                  2307 Male, age 80, both hemispheres 30909.6
                                  2191 Female, age 85, both hemispheres 30689.6
                                  2656 Male, age 76, both hemispheres 16227.7
                                  2144 Female, age 91, right hemisphere 7717.5
                                  Parvicellular reticular nuclei
                                  nTPM: 15789.6
                                  2558 Male, age 74, both hemispheres 19019.2
                                  2095 Male, age 76, both hemispheres 17972.8
                                  2119 Male, age 80, both hemispheres 10377.0
                                  Parvicellular reticular nuclei, medullary
                                  nTPM: 18793.2
                                  2181 Male, age 80, left hemisphere 24751.1
                                  2091 Female, age 85, both hemispheres 15869.4
                                  2189 Female, age 91, both hemispheres 15759.0
                                  Peritrigeminal nucleus
                                  nTPM: 12340.5
                                  2136 Male, age 76, both hemispheres 17152.0
                                  2179 Male, age 61, both hemispheres 11759.5
                                  2067 Female, age 85, both hemispheres 8110.0
                                  Prepositus hypoglossal nucleus
                                  nTPM: 17466.2
                                  2855 Female, age 85, right hemisphere 20555.0
                                  2086 Male, age 80, both hemispheres 14377.4
                                  Spinal trigeminal nucleus, caudal
                                  nTPM: 24828.9
                                  2390 Female, age 91, both hemispheres 34688.6
                                  2308 Male, age 80, both hemispheres 31440.8
                                  2447 Male, age 76, both hemispheres 22037.9
                                  2642 Male, age 74, both hemispheres 18469.5
                                  2312 Male, age 61, both hemispheres 17508.0
                                  Spinal trigeminal nucleus, interpolar
                                  nTPM: 21017.4
                                  2625 Male, age 61, both hemispheres 36621.4
                                  2389 Female, age 91, both hemispheres 31458.6
                                  2066 Male, age 76, right hemisphere 13388.4
                                  2386 Female, age 85, both hemispheres 11982.4
                                  2033 Male, age 80, both hemispheres 11636.1
                                  Spinal vestibular nucleus
                                  nTPM: 18774.7
                                  2796 Male, age 61, both hemispheres 31090.3
                                  2806 Female, age 85, both hemispheres 24779.9
                                  2186 Female, age 91, both hemispheres 15882.1
                                  2748 Male, age 76, both hemispheres 14190.9
                                  2384 Male, age 74, both hemispheres 14083.2
                                  2780 Male, age 80, both hemispheres 12621.9
                                  Superior vestibular nucleus
                                  nTPM: 10613.5
                                  2061 Male, age 76, both hemispheres 12863.3
                                  2015 Male, age 80, both hemispheres 9793.2
                                  2383 Male, age 74, both hemispheres 9184.1
                                  Ventral medullary reticular nucleus
                                  nTPM: 18878.1
                                  2372 Male, age 61, both hemispheres 22730.2
                                  2060 Male, age 76, both hemispheres 15026.0
                                  Ventrolateral medulla, A1-C1 cell groups
                                  nTPM: 15863.6
                                  2302 Female, age 91, both hemispheres 24248.4
                                  2180 Male, age 61, both hemispheres 17689.4
                                  2118 Male, age 80, both hemispheres 14984.8
                                  1986 Male, age 76, both hemispheres 12269.4
                                  2741 Female, age 85, both hemispheres 10125.9

                                  MEDULLA OBLONGATA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 8527.4
                                  Pig sample Sample description nTPM
                                  8135.58756.09147.98708.510181.301,0002,0003,0004,0005,0006,0007,0008,0009,00010,000
                                  8135.58756.09147.98708.510181.301,0002,0003,0004,0005,0006,0007,0008,0009,00010,000
                                  Medulla oblongata
                                  nTPM: 8527.4
                                  Samples: 4

                                  Max nTPM: 10181.3
                                  Min nTPM: 6416.4
                                  Sample A Female 10181.3
                                  Sample B Female 8803.4
                                  Sample C Male 8708.5
                                  Sample D Male 6416.4

                                  MEDULLA OBLONGATA - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 19.1
                                  Allen experiment id Experiment description Expression energy
                                  Medulla oblongata
                                  Expression energy: 19.1
                                  75080269 Antisense, RP_060412_06_H09, Mouse strain C57BL/6J (56 days, male) 20.2
                                  73906215 Antisense, RP_051212_04_H07, Mouse strain C57BL/6J (56 days, male) 18.0

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