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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
32531.4
nTPM
Pig:
10668.4
nTPM
Allen mouse:
19.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
32531.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 20455.6
2301
Female, age 85, both hemispheres
37357.3
2188
Female, age 91, both hemispheres
18144.2
1984
Male, age 76, both hemispheres
14703.0
2090
Male, age 80, both hemispheres
11617.9
Dorsal cochlear nucleus nTPM: 23317.2
2378
Male, age 80, both hemispheres
38819.8
2802
Male, age 74, right hemisphere
25699.2
2187
Female, age 91, both hemispheres
17810.5
2058
Male, age 76, both hemispheres
17696.7
2370
Male, age 61, both hemispheres
16559.7
Dorsal tegmental nucleus nTPM: 21083.4
2358
Male, age 61, both hemispheres
37247.1
1936
Male, age 76, left hemisphere
17085.4
2083
Male, age 80, both hemispheres
16487.0
2326
Male, age 74, both hemispheres
13514.2
Dorsolateral tegmental area nTPM: 13358.4
2141
Male, age 76, both hemispheres
22309.9
2337
Male, age 61, both hemispheres
16149.7
2654
Male, age 80, both hemispheres
13678.8
2751
Female, age 85, both hemispheres
8014.1
2360
Male, age 74, both hemispheres
6639.5
Kolliker-Fuse nucleus nTPM: 20998.1
2793
Female, age 91, left hemisphere
37070.0
2163
Male, age 80, both hemispheres
18714.4
2315
Male, age 76, right hemisphere
7209.9
Lateral lemniscal nuclei nTPM: 18179.4
2320
Female, age 91, left hemisphere
29574.9
2169
Male, age 76, both hemispheres
22996.0
2453
Male, age 74, right hemisphere
21912.1
2036
Male, age 80, both hemispheres
10904.3
2746
Female, age 85, left hemisphere
5509.9
Lateral parabrachial nucleus nTPM: 13335.4
2792
Male, age 76, both hemispheres
19885.2
2790
Male, age 61, both hemispheres
15980.4
2139
Female, age 85, right hemisphere
10341.7
2013
Male, age 80, both hemispheres
7134.3
Lateral vestibular nucleus nTPM: 31153.4
2184
Male, age 76, both hemispheres
35561.0
2311
Male, age 80, both hemispheres
26745.8
Locus coeruleus nTPM: 17561.9
2720
Male, age 74, both hemispheres
35380.7
2162
Male, age 80, both hemispheres
22176.9
2788
Male, age 74, unknown
18266.6
2317
Female, age 72, unknown
14242.2
1980
Male, age 76, both hemispheres
13314.9
2014
Male, age 55, unknown
11225.7
2123
Female, age 91, both hemispheres
8326.4
Medial parabrachial nucleus nTPM: 16581.3
2854
Male, age 80, both hemispheres
27880.4
2786
Male, age 76, both hemispheres
21819.8
2156
Male, age 61, both hemispheres
17807.2
2170
Female, age 91, both hemispheres
11555.8
2463
Female, age 85, right hemisphere
3843.4
Medial periolivary nuclei nTPM: 16337.5
2458
Female, age 91, both hemispheres
32274.9
2171
Female, age 85, both hemispheres
19818.5
2063
Male, age 76, both hemispheres
11346.4
2081
Male, age 80, both hemispheres
9869.6
2791
Male, age 74, right hemisphere
8377.8
Motor facial nucleus nTPM: 29373.7
2795
Female, age 91, both hemispheres
56200.6
2697
Female, age 85, both hemispheres
43086.6
2327
Male, age 80, both hemispheres
42232.1
2365
Male, age 74, right hemisphere
12589.6
2062
Male, age 76, both hemispheres
11430.5
2126
Male, age 61, both hemispheres
10702.6
Motor trigeminal nucleus nTPM: 20449.3
2321
Female, age 91, both hemispheres
32244.8
2309
Male, age 76, both hemispheres
20181.4
2335
Male, age 61, both hemispheres
17947.3
2560
Male, age 74, both hemispheres
17886.2
2079
Male, age 80, both hemispheres
13986.7
Nuclei of the trapezoid body nTPM: 17324.7
2368
Female, age 91, both hemispheres
30868.9
2166
Male, age 80, both hemispheres
20882.8
1983
Male, age 76, both hemispheres
13251.6
2159
Male, age 61, both hemispheres
12168.6
2735
Female, age 85, both hemispheres
9451.5
Nucleus raphe magnus nTPM: 21983.9
2328
Male, age 80, both hemispheres
33072.1
2459
Female, age 91, both hemispheres
29672.7
2172
Female, age 85, both hemispheres
26585.3
2455
Male, age 74, both hemispheres
16032.8
2051
Male, age 76, both hemispheres
15547.1
2160
Male, age 61, both hemispheres
10993.6
Paramedian reticular nucleus nTPM: 14642.9
2313
Male, age 61, both hemispheres
20561.0
2052
Male, age 76, both hemispheres
15846.0
2050
Female, age 85, both hemispheres
14715.7
2057
Male, age 80, both hemispheres
7449.0
Pedunculopontine tegmental nucleus nTPM: 17581.7
2334
Male, age 80, both hemispheres
22453.3
2338
Male, age 61, both hemispheres
20961.2
1921
Female, age 85, both hemispheres
9330.6
Pontine nuclei nTPM: 11221.1
2319
Female, age 91, both hemispheres
19996.3
2787
Female, age 85, both hemispheres
15150.1
2115
Male, age 80, left hemisphere
12389.9
2454
Male, age 74, left hemisphere
11230.2
1863
Male, age 55, unknown
10648.7
1968
Male, age 76, left hemisphere
10033.9
2109
Female, age 72, unknown
6324.7
2727
Male, age 61, right hemisphere
3994.9
Pontine raphe nucleus nTPM: 16958.5
2853
Male, age 76, midline
21633.3
2122
Female, age 85, midline
12283.7
Posteroventral cochlear nucleus nTPM: 13827.7
2341
Male, age 80, both hemispheres
21183.9
2371
Male, age 61, both hemispheres
17632.0
2752
Female, age 85, both hemispheres
11505.8
2070
Male, age 76, both hemispheres
9543.6
2135
Female, age 91, both hemispheres
9273.5
Principal sensory trigeminal nucleus nTPM: 23756.8
2324
Male, age 76, both hemispheres
45629.9
2367
Female, age 91, left hemisphere
29838.2
2158
Male, age 61, both hemispheres
11112.8
2008
Male, age 80, left hemisphere
8446.2
Reticular pontine nucleus, caudal nTPM: 24091.6
2332
Male, age 80, right hemisphere
38468.0
2457
Female, age 91, both hemispheres
32584.6
2092
Male, age 76, both hemispheres
13262.4
2559
Male, age 74, both hemispheres
12051.5
Reticular pontine nucleus, oral nTPM: 17047.0
2366
Female, age 91, both hemispheres
35945.2
2167
Male, age 76, both hemispheres
22071.7
1939
Male, age 80, both hemispheres
10681.2
2361
Male, age 74, both hemispheres
8811.4
2012
Female, age 85, both hemispheres
7725.5
Reticulotegmental nucleus nTPM: 32531.4
2322
Female, age 91, both hemispheres
39785.5
2333
Male, age 80, both hemispheres
37326.6
2325
Male, age 76, both hemispheres
31299.6
2452
Male, age 74, both hemispheres
21714.1
Spinal trigeminal nucleus, oral nTPM: 20166.9
2164
Male, age 80, both hemispheres
36297.4
1978
Male, age 76, both hemispheres
15007.9
2737
Female, age 85, both hemispheres
9195.3
Subcoeruleus area nTPM: 14195.0
2323
Female, age 91, left hemisphere
17907.1
2451
Male, age 74, both hemispheres
16018.2
1958
Male, age 80, both hemispheres
14667.4
2089
Male, age 76, left hemisphere
14663.1
2369
Female, age 85, left hemisphere
7719.1
Superior olive nTPM: 19710.1
2561
Female, age 91, both hemispheres
39071.3
2329
Male, age 80, right hemisphere
33936.6
2020
Male, age 76, both hemispheres
10565.2
1875
Female, age 85, both hemispheres
7773.6
2364
Male, age 74, right hemisphere
7203.7
Ventral periolivary nuclei nTPM: 19787.4
2794
Female, age 91, left hemisphere
32520.8
2165
Male, age 80, both hemispheres
24342.5
2130
Female, age 85, both hemispheres
14886.6
2023
Male, age 76, both hemispheres
7399.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 23143.5
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
10668.4
Pig sample
Sample description
nTPM
Pons nTPM: 10668.5
Samples: 4
Max nTPM: 13266.6
Min nTPM: 7324.7
Sample A
Female
12366.5
Sample B
Female
7324.7
Sample C
Male
9716.0
Sample D
Male
13266.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
