HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:245.7 nTPM
HPA Brain:215.0 nTPM
GTEx:245.7 nTPM
FANTOM5:506.2 Scaled Tags Per Million
Pig:165.1 nTPM
Mouse:261.2 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004288
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 215.0
Sample id Sample description nTPM
Hippocampus
nTPM: 212.9
1898 Male, age 80, left hemisphere 228.4
2621 Female, age 67, right hemisphere 223.7
2529 Female, age 94, left hemisphere 223.2
2148 Female, age 91, left hemisphere 208.4
1911 Female, age 85, right hemisphere 203.5
1855 Male, age 76, left hemisphere 190.3
Dentate gyrus
nTPM: 215.0
2530 Female, age 94, left hemisphere 249.4
2528 Male, age 74, both hemispheres 220.6
2531 Female, age 67, both hemispheres 219.8
2010 Male, age 76, both hemispheres 219.7
2246 Female, age 85, both hemispheres 199.9
1927 Female, age 91, both hemispheres 180.4
Entorhinal gyrus
nTPM: 194.0
2117 Female, age 91, right hemisphere 228.0
2686 Male, age 75, right hemisphere 217.8
2764 Male, age 80, right hemisphere 204.5
1787 Male, age 76, left hemisphere 189.7
2613 Female, age 94, left hemisphere 162.7
1938 Female, age 85, left hemisphere 161.1
Hippocampus, CA1
nTPM: 199.6
2045 Male, age 76, both hemispheres 206.0
2082 Female, age 91, right hemisphere 205.1
2749 Male, age 80, left hemisphere 200.4
2527 Male, age 74, both hemispheres 195.1
1873 Female, age 85, both hemispheres 191.4
Hippocampus, CA2
nTPM: 203.0
1963 Male, age 80, left hemisphere 230.0
2437 Female, age 94, left hemisphere 206.4
1940 Female, age 85, left hemisphere 198.4
2249 Male, age 74, both hemispheres 197.7
1892 Male, age 76, both hemispheres 193.4
2113 Female, age 91, right hemisphere 192.2
Hippocampus, CA3
nTPM: 198.8
2861 Female, age 67, both hemispheres 222.5
2436 Male, age 74, both hemispheres 218.9
1867 Male, age 76, both hemispheres 215.7
1891 Female, age 85, both hemispheres 196.7
2137 Male, age 80, left hemisphere 171.5
2620 Female, age 94, left hemisphere 167.5
Parahippocampal cortex
nTPM: 185.7
2018 Male, age 76, both hemispheres 233.6
2245 Female, age 91, both hemispheres 195.5
2532 Female, age 72, left hemisphere 193.0
2250 Female, age 67, right hemisphere 190.9
1850 Male, age 80, both hemispheres 187.7
1990 Female, age 91, right hemisphere 186.7
1933 Female, age 85, both hemispheres 176.1
2622 Female, age 67, right hemisphere 175.8
2692 Male, age 74, both hemispheres 175.7
2693 Female, age 94, both hemispheres 142.4
Perirhinal gyrus
nTPM: 186.1
2521 Female, age 94, right hemisphere 196.3
1794 Male, age 80, right hemisphere 192.2
1847 Female, age 91, left hemisphere 187.1
1841 Female, age 85, right hemisphere 181.9
2848 Male, age 76, right hemisphere 172.9
Subiculum
nTPM: 198.6
2042 Male, age 76, both hemispheres 234.9
1977 Female, age 85, both hemispheres 200.7
2438 Female, age 94, left hemisphere 191.4
2619 Male, age 74, both hemispheres 190.4
1901 Male, age 80, both hemispheres 187.1
2729 Female, age 91, right hemisphere 187.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 245.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 245.7
Samples: 197

Max nTPM: 446.5
Min nTPM: 139.5
Std nTPM: 55.7
Median nTPM: 233.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 446.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 445.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 433.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 429.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 418.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 363.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 362.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 360.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 360.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 356.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 350.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 506.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 506.2
FF:10153-102I9 76 years, female 516.1
FF:10169-103B7 60 years, female 496.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 165.1
Pig sample Sample description nTPM
Subiculum
nTPM: 158.5
Samples: 4

Max nTPM: 202.2
Min nTPM: 134.8
Sample A Female 202.2
Sample B Female 152.5
Sample C Male 144.4
Sample D Male 134.8
Dorsal hippocampus
nTPM: 165.1
Samples: 4

Max nTPM: 194.3
Min nTPM: 132.1
Sample A Female 194.3
Sample B Female 156.4
Sample C Male 177.5
Sample D Male 132.1
Entorhinal cortex
nTPM: 141.7
Samples: 4

Max nTPM: 164.6
Min nTPM: 111.6
Sample A Female 139.8
Sample B Female 164.6
Sample C Male 150.9
Sample D Male 111.6
Ventral hippocampus
nTPM: 158.8
Samples: 4

Max nTPM: 204.8
Min nTPM: 132.2
Sample A Female 151.5
Sample B Female 132.2
Sample C Male 204.8
Sample D Male 146.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 261.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 255.1
Samples: 4

Max nTPM: 265.5
Min nTPM: 239.9
Sample A Male 257.5
Sample B Male 257.6
Sample C Female 265.5
Sample D Female 239.9
Hippocampal formation
nTPM: 261.2
Samples: 4

Max nTPM: 285.3
Min nTPM: 236.2
Sample A Male 285.3
Sample B Male 247.5
Sample C Female 236.2
Sample D Female 275.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
71021172 Antisense, RP_050531_01_G07, Mouse strain C57BL/6J (56 days, male) 6.3

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