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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
286.5
nTPM
FANTOM5:
539.6
Scaled Tags Per Million
Pig:
201.4
nTPM
Allen mouse:
2.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
286.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 286.5
2090
Male, age 80, both hemispheres
304.0
2188
Female, age 91, both hemispheres
288.2
2301
Female, age 85, both hemispheres
284.1
1984
Male, age 76, both hemispheres
269.6
Dorsal cochlear nucleus nTPM: 260.0
2187
Female, age 91, both hemispheres
281.9
2802
Male, age 74, right hemisphere
281.8
2378
Male, age 80, both hemispheres
268.1
2370
Male, age 61, both hemispheres
244.2
2058
Male, age 76, both hemispheres
223.9
Dorsal tegmental nucleus nTPM: 285.9
2358
Male, age 61, both hemispheres
339.6
2326
Male, age 74, both hemispheres
293.0
2083
Male, age 80, both hemispheres
287.6
1936
Male, age 76, left hemisphere
223.3
Dorsolateral tegmental area nTPM: 280.9
2337
Male, age 61, both hemispheres
421.4
2654
Male, age 80, both hemispheres
281.8
2360
Male, age 74, both hemispheres
247.8
2751
Female, age 85, both hemispheres
239.8
2141
Male, age 76, both hemispheres
213.7
Kolliker-Fuse nucleus nTPM: 270.8
2315
Male, age 76, right hemisphere
290.1
2793
Female, age 91, left hemisphere
266.8
2163
Male, age 80, both hemispheres
255.5
Lateral lemniscal nuclei nTPM: 268.1
2746
Female, age 85, left hemisphere
293.5
2036
Male, age 80, both hemispheres
276.6
2169
Male, age 76, both hemispheres
260.7
2320
Female, age 91, left hemisphere
260.7
2453
Male, age 74, right hemisphere
248.9
Lateral parabrachial nucleus nTPM: 283.3
2792
Male, age 76, both hemispheres
312.3
2139
Female, age 85, right hemisphere
293.8
2013
Male, age 80, both hemispheres
288.0
2790
Male, age 61, both hemispheres
239.2
Lateral vestibular nucleus nTPM: 261.8
2311
Male, age 80, both hemispheres
296.9
2184
Male, age 76, both hemispheres
226.8
Locus coeruleus nTPM: 254.1
2162
Male, age 80, both hemispheres
288.3
2123
Female, age 91, both hemispheres
277.5
1980
Male, age 76, both hemispheres
253.9
2720
Male, age 74, both hemispheres
248.7
2317
Female, age 72, unknown
247.1
2014
Male, age 55, unknown
246.1
2788
Male, age 74, unknown
216.9
Medial parabrachial nucleus nTPM: 263.2
2170
Female, age 91, both hemispheres
298.7
2156
Male, age 61, both hemispheres
261.8
2463
Female, age 85, right hemisphere
261.1
2854
Male, age 80, both hemispheres
257.8
2786
Male, age 76, both hemispheres
236.7
Medial periolivary nuclei nTPM: 265.4
2063
Male, age 76, both hemispheres
298.1
2081
Male, age 80, both hemispheres
281.0
2458
Female, age 91, both hemispheres
258.4
2171
Female, age 85, both hemispheres
256.1
2791
Male, age 74, right hemisphere
233.3
Motor facial nucleus nTPM: 257.3
2365
Male, age 74, right hemisphere
285.2
2062
Male, age 76, both hemispheres
268.1
2795
Female, age 91, both hemispheres
263.5
2126
Male, age 61, both hemispheres
254.3
2697
Female, age 85, both hemispheres
245.1
2327
Male, age 80, both hemispheres
227.6
Motor trigeminal nucleus nTPM: 260.5
2335
Male, age 61, both hemispheres
271.5
2079
Male, age 80, both hemispheres
271.0
2321
Female, age 91, both hemispheres
270.1
2560
Male, age 74, both hemispheres
267.3
2309
Male, age 76, both hemispheres
222.7
Nuclei of the trapezoid body nTPM: 268.2
1983
Male, age 76, both hemispheres
350.2
2166
Male, age 80, both hemispheres
258.2
2735
Female, age 85, both hemispheres
258.2
2159
Male, age 61, both hemispheres
241.1
2368
Female, age 91, both hemispheres
233.0
Nucleus raphe magnus nTPM: 267.2
2051
Male, age 76, both hemispheres
301.6
2455
Male, age 74, both hemispheres
280.9
2160
Male, age 61, both hemispheres
259.2
2172
Female, age 85, both hemispheres
257.7
2328
Male, age 80, both hemispheres
251.7
2459
Female, age 91, both hemispheres
251.7
Paramedian reticular nucleus nTPM: 253.6
2052
Male, age 76, both hemispheres
269.8
2057
Male, age 80, both hemispheres
266.1
2313
Male, age 61, both hemispheres
245.4
2050
Female, age 85, both hemispheres
233.1
Pedunculopontine tegmental nucleus nTPM: 271.7
2338
Male, age 61, both hemispheres
329.9
2334
Male, age 80, both hemispheres
278.3
1921
Female, age 85, both hemispheres
206.8
Pontine nuclei nTPM: 274.6
2787
Female, age 85, both hemispheres
305.9
1968
Male, age 76, left hemisphere
289.1
2115
Male, age 80, left hemisphere
281.9
2319
Female, age 91, both hemispheres
277.1
2109
Female, age 72, unknown
275.7
1863
Male, age 55, unknown
270.3
2727
Male, age 61, right hemisphere
255.5
2454
Male, age 74, left hemisphere
241.2
Pontine raphe nucleus nTPM: 231.5
2122
Female, age 85, midline
242.4
2853
Male, age 76, midline
220.6
Posteroventral cochlear nucleus nTPM: 272.0
2341
Male, age 80, both hemispheres
301.8
2135
Female, age 91, both hemispheres
298.4
2371
Male, age 61, both hemispheres
263.4
2070
Male, age 76, both hemispheres
252.7
2752
Female, age 85, both hemispheres
243.9
Principal sensory trigeminal nucleus nTPM: 256.7
2367
Female, age 91, left hemisphere
291.0
2158
Male, age 61, both hemispheres
258.6
2324
Male, age 76, both hemispheres
244.0
2008
Male, age 80, left hemisphere
233.2
Reticular pontine nucleus, caudal nTPM: 256.3
2457
Female, age 91, both hemispheres
277.1
2092
Male, age 76, both hemispheres
269.8
2559
Male, age 74, both hemispheres
257.3
2332
Male, age 80, right hemisphere
220.9
Reticular pontine nucleus, oral nTPM: 240.8
1939
Male, age 80, both hemispheres
255.7
2366
Female, age 91, both hemispheres
248.0
2167
Male, age 76, both hemispheres
240.0
2012
Female, age 85, both hemispheres
233.9
2361
Male, age 74, both hemispheres
226.4
Reticulotegmental nucleus nTPM: 257.8
2452
Male, age 74, both hemispheres
282.4
2333
Male, age 80, both hemispheres
262.8
2322
Female, age 91, both hemispheres
259.5
2325
Male, age 76, both hemispheres
226.4
Spinal trigeminal nucleus, oral nTPM: 236.8
2164
Male, age 80, both hemispheres
251.4
1978
Male, age 76, both hemispheres
248.2
2737
Female, age 85, both hemispheres
210.8
Subcoeruleus area nTPM: 244.2
2451
Male, age 74, both hemispheres
271.5
2369
Female, age 85, left hemisphere
245.4
2089
Male, age 76, left hemisphere
243.7
2323
Female, age 91, left hemisphere
231.9
1958
Male, age 80, both hemispheres
228.3
Superior olive nTPM: 252.8
2020
Male, age 76, both hemispheres
273.9
2364
Male, age 74, right hemisphere
266.1
2561
Female, age 91, both hemispheres
260.9
2329
Male, age 80, right hemisphere
239.6
1875
Female, age 85, both hemispheres
223.6
Ventral periolivary nuclei nTPM: 261.2
2023
Male, age 76, both hemispheres
280.0
2130
Female, age 85, both hemispheres
268.1
2794
Female, age 91, left hemisphere
250.3
2165
Male, age 80, both hemispheres
246.3
Ventrolateral tegmental area, A5 NE cell group nTPM: 258.5
2161
Male, age 80, both hemispheres
284.3
2359
Male, age 61, both hemispheres
281.2
2456
Female, age 91, both hemispheres
256.7
2840
Female, age 85, both hemispheres
255.0
1959
Male, age 76, both hemispheres
241.3
2449
Male, age 74, both hemispheres
232.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
201.4
Pig sample
Sample description
nTPM
Pons nTPM: 201.4
Samples: 4
Max nTPM: 214.7
Min nTPM: 166.9
Sample A
Female
210.3
Sample B
Female
166.9
Sample C
Male
213.6
Sample D
Male
214.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
