HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:479.0 nTPM
HPA Brain:377.9 nTPM
GTEx:479.0 nTPM
FANTOM5:42.3 Scaled Tags Per Million
Pig:428.0 nTPM
Mouse:938.5 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050924Antibody HPA053568
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 377.9
Sample id Sample description nTPM
Hippocampus
nTPM: 316.7
1898 Male, age 80, left hemisphere 455.1
2621 Female, age 67, right hemisphere 320.5
2148 Female, age 91, left hemisphere 310.5
1855 Male, age 76, left hemisphere 304.5
2529 Female, age 94, left hemisphere 286.0
1911 Female, age 85, right hemisphere 223.5
Dentate gyrus
nTPM: 311.1
2010 Male, age 76, both hemispheres 390.5
2530 Female, age 94, left hemisphere 351.4
1927 Female, age 91, both hemispheres 329.2
2528 Male, age 74, both hemispheres 279.8
2246 Female, age 85, both hemispheres 274.3
2531 Female, age 67, both hemispheres 241.1
Entorhinal gyrus
nTPM: 282.7
2764 Male, age 80, right hemisphere 363.4
1938 Female, age 85, left hemisphere 302.2
1787 Male, age 76, left hemisphere 266.0
2613 Female, age 94, left hemisphere 260.1
2686 Male, age 75, right hemisphere 260.0
2117 Female, age 91, right hemisphere 244.3
Hippocampus, CA1
nTPM: 377.9
2749 Male, age 80, left hemisphere 572.1
2527 Male, age 74, both hemispheres 363.2
1873 Female, age 85, both hemispheres 335.6
2045 Male, age 76, both hemispheres 333.1
2082 Female, age 91, right hemisphere 285.5
Hippocampus, CA2
nTPM: 319.7
1963 Male, age 80, left hemisphere 394.6
1892 Male, age 76, both hemispheres 384.5
2249 Male, age 74, both hemispheres 336.1
2437 Female, age 94, left hemisphere 279.5
2113 Female, age 91, right hemisphere 267.0
1940 Female, age 85, left hemisphere 256.3
Hippocampus, CA3
nTPM: 310.2
2137 Male, age 80, left hemisphere 362.9
2436 Male, age 74, both hemispheres 339.6
1867 Male, age 76, both hemispheres 334.2
2861 Female, age 67, both hemispheres 297.0
2620 Female, age 94, left hemisphere 274.2
1891 Female, age 85, both hemispheres 253.4
Parahippocampal cortex
nTPM: 308.6
2250 Female, age 67, right hemisphere 368.9
1850 Male, age 80, both hemispheres 365.8
2245 Female, age 91, both hemispheres 355.8
2018 Male, age 76, both hemispheres 337.0
1933 Female, age 85, both hemispheres 326.5
1990 Female, age 91, right hemisphere 306.4
2532 Female, age 72, left hemisphere 304.5
2693 Female, age 94, both hemispheres 263.4
2692 Male, age 74, both hemispheres 235.8
2622 Female, age 67, right hemisphere 221.7
Perirhinal gyrus
nTPM: 368.4
1847 Female, age 91, left hemisphere 449.7
1794 Male, age 80, right hemisphere 395.5
1841 Female, age 85, right hemisphere 369.9
2521 Female, age 94, right hemisphere 349.7
2848 Male, age 76, right hemisphere 277.3
Subiculum
nTPM: 264.3
1977 Female, age 85, both hemispheres 320.1
1901 Male, age 80, both hemispheres 302.3
2619 Male, age 74, both hemispheres 267.6
2042 Male, age 76, both hemispheres 247.9
2729 Female, age 91, right hemisphere 234.1
2438 Female, age 94, left hemisphere 213.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 479.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 479.0
Samples: 197

Max nTPM: 983.2
Min nTPM: 199.0
Std nTPM: 164.4
Median nTPM: 453.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 983.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 923.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 867.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 838.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 838.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 821.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 817.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 796.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 795.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 792.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 786.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.3
FF:10169-103B7 60 years, female 57.1
FF:10153-102I9 76 years, female 27.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 428.0
Pig sample Sample description nTPM
Subiculum
nTPM: 383.0
Samples: 4

Max nTPM: 438.4
Min nTPM: 337.7
Sample A Female 438.4
Sample B Female 337.7
Sample C Male 371.1
Sample D Male 384.9
Dorsal hippocampus
nTPM: 428.0
Samples: 4

Max nTPM: 538.1
Min nTPM: 320.9
Sample A Female 538.1
Sample B Female 417.1
Sample C Male 435.9
Sample D Male 320.9
Entorhinal cortex
nTPM: 393.8
Samples: 4

Max nTPM: 407.6
Min nTPM: 358.9
Sample A Female 406.9
Sample B Female 407.6
Sample C Male 401.7
Sample D Male 358.9
Ventral hippocampus
nTPM: 418.2
Samples: 4

Max nTPM: 517.9
Min nTPM: 277.7
Sample A Female 431.2
Sample B Female 277.7
Sample C Male 517.9
Sample D Male 445.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 938.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 938.5
Samples: 4

Max nTPM: 1064.0
Min nTPM: 833.4
Sample A Male 833.4
Sample B Male 905.3
Sample C Female 951.3
Sample D Female 1064.0
Hippocampal formation
nTPM: 908.8
Samples: 4

Max nTPM: 935.7
Min nTPM: 854.0
Sample A Male 935.7
Sample B Male 854.0
Sample C Female 933.7
Sample D Female 911.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
70191997 Antisense, RP_050517_01_A08, Mouse strain C57BL/6J (56 days, male) 22.4

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