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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
356.7
nTPM
FANTOM5:
33.9
Scaled Tags Per Million
Pig:
495.6
nTPM
Allen mouse:
14.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
356.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 228.9
1984
Male, age 76, both hemispheres
261.1
2090
Male, age 80, both hemispheres
234.6
2188
Female, age 91, both hemispheres
226.7
2301
Female, age 85, both hemispheres
193.2
Dorsal cochlear nucleus nTPM: 258.9
2802
Male, age 74, right hemisphere
320.5
2058
Male, age 76, both hemispheres
269.1
2187
Female, age 91, both hemispheres
264.3
2370
Male, age 61, both hemispheres
231.0
2378
Male, age 80, both hemispheres
209.3
Dorsal tegmental nucleus nTPM: 256.8
2083
Male, age 80, both hemispheres
306.5
2326
Male, age 74, both hemispheres
256.1
2358
Male, age 61, both hemispheres
233.6
1936
Male, age 76, left hemisphere
230.9
Dorsolateral tegmental area nTPM: 261.1
2654
Male, age 80, both hemispheres
306.3
2751
Female, age 85, both hemispheres
290.0
2141
Male, age 76, both hemispheres
263.2
2360
Male, age 74, both hemispheres
226.0
2337
Male, age 61, both hemispheres
219.9
Kolliker-Fuse nucleus nTPM: 266.5
2163
Male, age 80, both hemispheres
317.6
2315
Male, age 76, right hemisphere
268.0
2793
Female, age 91, left hemisphere
213.9
Lateral lemniscal nuclei nTPM: 245.9
2169
Male, age 76, both hemispheres
301.9
2453
Male, age 74, right hemisphere
269.7
2746
Female, age 85, left hemisphere
256.8
2036
Male, age 80, both hemispheres
219.6
2320
Female, age 91, left hemisphere
181.4
Lateral parabrachial nucleus nTPM: 256.4
2139
Female, age 85, right hemisphere
330.5
2790
Male, age 61, both hemispheres
244.2
2013
Male, age 80, both hemispheres
242.2
2792
Male, age 76, both hemispheres
208.9
Lateral vestibular nucleus nTPM: 267.3
2184
Male, age 76, both hemispheres
302.6
2311
Male, age 80, both hemispheres
231.9
Locus coeruleus nTPM: 356.7
2123
Female, age 91, both hemispheres
526.2
2014
Male, age 55, unknown
397.7
2788
Male, age 74, unknown
345.3
2720
Male, age 74, both hemispheres
340.6
2317
Female, age 72, unknown
317.7
1980
Male, age 76, both hemispheres
297.7
2162
Male, age 80, both hemispheres
272.1
Medial parabrachial nucleus nTPM: 273.2
2170
Female, age 91, both hemispheres
322.0
2854
Male, age 80, both hemispheres
274.1
2463
Female, age 85, right hemisphere
262.9
2156
Male, age 61, both hemispheres
259.3
2786
Male, age 76, both hemispheres
247.7
Medial periolivary nuclei nTPM: 274.4
2171
Female, age 85, both hemispheres
364.0
2063
Male, age 76, both hemispheres
350.5
2791
Male, age 74, right hemisphere
268.3
2081
Male, age 80, both hemispheres
205.5
2458
Female, age 91, both hemispheres
183.9
Motor facial nucleus nTPM: 266.8
2062
Male, age 76, both hemispheres
343.6
2365
Male, age 74, right hemisphere
280.7
2697
Female, age 85, both hemispheres
253.5
2126
Male, age 61, both hemispheres
244.4
2795
Female, age 91, both hemispheres
241.5
2327
Male, age 80, both hemispheres
237.2
Motor trigeminal nucleus nTPM: 236.1
2079
Male, age 80, both hemispheres
270.6
2335
Male, age 61, both hemispheres
253.0
2560
Male, age 74, both hemispheres
235.2
2309
Male, age 76, both hemispheres
227.8
2321
Female, age 91, both hemispheres
194.2
Nuclei of the trapezoid body nTPM: 298.8
2159
Male, age 61, both hemispheres
388.1
2735
Female, age 85, both hemispheres
341.2
1983
Male, age 76, both hemispheres
337.4
2166
Male, age 80, both hemispheres
236.9
2368
Female, age 91, both hemispheres
190.3
Nucleus raphe magnus nTPM: 299.1
2160
Male, age 61, both hemispheres
455.9
2172
Female, age 85, both hemispheres
353.9
2455
Male, age 74, both hemispheres
315.7
2328
Male, age 80, both hemispheres
250.5
2051
Male, age 76, both hemispheres
229.1
2459
Female, age 91, both hemispheres
189.4
Paramedian reticular nucleus nTPM: 301.6
2050
Female, age 85, both hemispheres
351.3
2057
Male, age 80, both hemispheres
320.9
2313
Male, age 61, both hemispheres
309.0
2052
Male, age 76, both hemispheres
225.2
Pedunculopontine tegmental nucleus nTPM: 269.5
1921
Female, age 85, both hemispheres
281.3
2334
Male, age 80, both hemispheres
277.0
2338
Male, age 61, both hemispheres
250.4
Pontine nuclei nTPM: 314.7
1863
Male, age 55, unknown
439.8
2787
Female, age 85, both hemispheres
402.5
2727
Male, age 61, right hemisphere
401.6
2109
Female, age 72, unknown
334.0
1968
Male, age 76, left hemisphere
263.2
2454
Male, age 74, left hemisphere
241.2
2115
Male, age 80, left hemisphere
223.4
2319
Female, age 91, both hemispheres
212.0
Pontine raphe nucleus nTPM: 312.2
2122
Female, age 85, midline
349.8
2853
Male, age 76, midline
274.6
Posteroventral cochlear nucleus nTPM: 255.7
2752
Female, age 85, both hemispheres
342.8
2070
Male, age 76, both hemispheres
280.2
2341
Male, age 80, both hemispheres
238.8
2371
Male, age 61, both hemispheres
219.5
2135
Female, age 91, both hemispheres
197.4
Principal sensory trigeminal nucleus nTPM: 276.1
2158
Male, age 61, both hemispheres
393.6
2008
Male, age 80, left hemisphere
262.5
2324
Male, age 76, both hemispheres
256.2
2367
Female, age 91, left hemisphere
192.3
Reticular pontine nucleus, caudal nTPM: 257.3
2092
Male, age 76, both hemispheres
293.5
2332
Male, age 80, right hemisphere
269.1
2559
Male, age 74, both hemispheres
247.7
2457
Female, age 91, both hemispheres
218.8
Reticular pontine nucleus, oral nTPM: 267.8
1939
Male, age 80, both hemispheres
293.5
2012
Female, age 85, both hemispheres
291.1
2361
Male, age 74, both hemispheres
289.6
2167
Male, age 76, both hemispheres
260.0
2366
Female, age 91, both hemispheres
204.7
Reticulotegmental nucleus nTPM: 280.0
2325
Male, age 76, both hemispheres
299.8
2452
Male, age 74, both hemispheres
292.7
2333
Male, age 80, both hemispheres
268.9
2322
Female, age 91, both hemispheres
258.4
Spinal trigeminal nucleus, oral nTPM: 266.2
2737
Female, age 85, both hemispheres
312.7
2164
Male, age 80, both hemispheres
277.1
1978
Male, age 76, both hemispheres
208.7
Subcoeruleus area nTPM: 284.3
2323
Female, age 91, left hemisphere
344.6
1958
Male, age 80, both hemispheres
291.9
2451
Male, age 74, both hemispheres
287.4
2369
Female, age 85, left hemisphere
255.0
2089
Male, age 76, left hemisphere
242.7
Superior olive nTPM: 256.9
1875
Female, age 85, both hemispheres
337.2
2364
Male, age 74, right hemisphere
272.8
2020
Male, age 76, both hemispheres
253.0
2329
Male, age 80, right hemisphere
232.3
2561
Female, age 91, both hemispheres
188.9
Ventral periolivary nuclei nTPM: 273.4
2165
Male, age 80, both hemispheres
331.8
2130
Female, age 85, both hemispheres
307.8
2023
Male, age 76, both hemispheres
247.0
2794
Female, age 91, left hemisphere
206.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 247.3
2359
Male, age 61, both hemispheres
279.2
2840
Female, age 85, both hemispheres
277.6
2449
Male, age 74, both hemispheres
266.6
1959
Male, age 76, both hemispheres
255.6
2161
Male, age 80, both hemispheres
234.7
2456
Female, age 91, both hemispheres
170.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
495.6
Pig sample
Sample description
nTPM
Pons nTPM: 495.6
Samples: 4
Max nTPM: 601.9
Min nTPM: 369.9
Sample A
Female
547.3
Sample B
Female
369.9
Sample C
Male
463.1
Sample D
Male
601.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
