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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
606.1
nTPM
GTEx:
606.1
nTPM
FANTOM5:
28.0
Scaled Tags Per Million
Pig:
229.4
nTPM
Mouse:
1690.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
606.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 606.1
Samples: 105
Max nTPM: 1561.5
Min nTPM: 148.3
Std nTPM: 261.7
Median nTPM:
218_1
71 years, female
1561.5
386_1
76 years, male
1310.8
379_1
60 years, male
1250.8
237_1
82 years, male
1144.9
6_1
73 years, female
1143.4
173_1
67 years, male
1142.3
375_1
74 years, female
1134.7
447_1
81 years, male
1083.2
322_1
76 years, male
1061.7
384_1
83 years, male
1005.2
347_1
72 years, male
985.0
307_1
66 years, female
972.5
316_1
62 years, male
937.7
145_1
84 years, male
881.5
120_1
70 years, female
881.0
35_1
74 years, female
854.7
319_1
81 years, male
850.2
452_1
88 years, female
850.1
350_1
84 years, female
847.6
17_1
71 years, male
820.6
4_1
88 years, female
818.8
295_1
61 years, female
796.1
321_1
62 years, female
795.7
354_1
81 years, female
783.4
351_1
91 years, male
744.2
506_1
65 years, male
742.1
42_1
85 years, male
737.6
117_1
61 years, male
714.5
317_1
60 years, male
692.6
353_1
82 years, female
688.6
2_1
77 years, female
686.7
348_1
84 years, male
675.0
318_1
68 years, male
670.2
291_1
76 years, male
666.2
243_1
75 years, male
663.3
377_1
82 years, female
654.5
308_1
70 years, female
654.4
389_1
86 years, female
644.1
320_1
89 years, female
640.9
137_1
83 years, male
629.4
518_1
75 years, female
629.0
99_1
64 years, male
619.4
396_1
62 years, male
617.5
41_1
94 years, female
609.5
119_1
70 years, female
583.5
311_1
78 years, male
577.4
163_1
78 years, male
565.7
139_1
64 years, female
564.7
355_1
70 years, female
564.3
335_1
73 years, female
552.0
18_1
88 years, male
551.7
495_1
57 years, female
551.3
288_1
66 years, female
549.2
376_1
75 years, female
543.9
349_1
83 years, male
541.7
425_1
59 years, female
528.6
264_1
73 years, female
525.4
315_1
62 years, female
520.8
126_1
63 years, male
518.0
405_1
91 years, male
514.3
313_1
79 years, female
508.1
172_1
72 years, female
503.8
177_1
74 years, male
502.0
265_1
87 years, male
499.6
314_1
67 years, male
498.7
115_1
83 years, male
495.9
404_1
82 years, female
484.6
526_1
61 years, male
482.3
189_1
76 years, male
480.2
153_1
70 years, female
477.8
480_1
63 years, male
476.7
142_1
61 years, female
470.4
293_1
68 years, female
470.4
43_1
64 years, female
468.2
394_1
75 years, female
466.5
356_1
87 years, female
463.5
406_1
79 years, male
453.5
324_1
76 years, male
445.0
292_1
71 years, male
439.0
352_1
62 years, male
424.3
503_1
68 years, male
416.7
109_1
81 years, female
413.4
162_1
79 years, female
410.9
254_1
77 years, female
403.7
517_1
88 years, male
399.3
246_1
77 years, male
399.0
251_1
78 years, male
380.5
81_1
67 years, male
371.9
468_1
89 years, male
366.8
286_1
68 years, female
361.7
490_1
67 years, female
349.4
501_1
88 years, male
340.3
499_1
55 years, female
330.8
9_1
66 years, female
328.5
217_1
76 years, male
326.8
491_1
89 years, female
309.1
229_1
69 years, female
308.3
89_1
63 years, male
306.1
266_1
85 years, male
289.3
32_1
67 years, male
248.6
466_1
57 years, female
224.9
415_1
77 years, female
222.3
149_1
88 years, male
215.9
414_1
84 years, female
213.4
413_1
59 years, female
148.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.