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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
393.4
nTPM
FANTOM5:
633.7
Scaled Tags Per Million
Pig:
128.2
nTPM
Allen mouse:
4.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
393.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 307.1
2301
Female, age 85, both hemispheres
330.8
2090
Male, age 80, both hemispheres
329.1
2188
Female, age 91, both hemispheres
311.7
1984
Male, age 76, both hemispheres
256.9
Dorsal cochlear nucleus nTPM: 327.8
2187
Female, age 91, both hemispheres
350.8
2058
Male, age 76, both hemispheres
332.0
2370
Male, age 61, both hemispheres
330.8
2378
Male, age 80, both hemispheres
322.4
2802
Male, age 74, right hemisphere
302.8
Dorsal tegmental nucleus nTPM: 356.7
2083
Male, age 80, both hemispheres
392.7
2326
Male, age 74, both hemispheres
367.3
1936
Male, age 76, left hemisphere
354.0
2358
Male, age 61, both hemispheres
312.8
Dorsolateral tegmental area nTPM: 392.6
2751
Female, age 85, both hemispheres
447.6
2654
Male, age 80, both hemispheres
401.5
2360
Male, age 74, both hemispheres
394.4
2337
Male, age 61, both hemispheres
390.9
2141
Male, age 76, both hemispheres
328.4
Kolliker-Fuse nucleus nTPM: 393.4
2315
Male, age 76, right hemisphere
549.9
2163
Male, age 80, both hemispheres
364.2
2793
Female, age 91, left hemisphere
266.2
Lateral lemniscal nuclei nTPM: 284.2
2746
Female, age 85, left hemisphere
349.6
2169
Male, age 76, both hemispheres
305.5
2036
Male, age 80, both hemispheres
299.1
2320
Female, age 91, left hemisphere
236.0
2453
Male, age 74, right hemisphere
230.7
Lateral parabrachial nucleus nTPM: 371.6
2139
Female, age 85, right hemisphere
420.1
2792
Male, age 76, both hemispheres
413.5
2013
Male, age 80, both hemispheres
372.9
2790
Male, age 61, both hemispheres
279.9
Lateral vestibular nucleus nTPM: 350.5
2184
Male, age 76, both hemispheres
354.1
2311
Male, age 80, both hemispheres
347.0
Locus coeruleus nTPM: 393.4
2014
Male, age 55, unknown
491.3
2123
Female, age 91, both hemispheres
429.4
2788
Male, age 74, unknown
422.3
2317
Female, age 72, unknown
405.9
1980
Male, age 76, both hemispheres
396.0
2162
Male, age 80, both hemispheres
324.4
2720
Male, age 74, both hemispheres
284.2
Medial parabrachial nucleus nTPM: 341.7
2170
Female, age 91, both hemispheres
403.8
2463
Female, age 85, right hemisphere
347.8
2854
Male, age 80, both hemispheres
320.5
2156
Male, age 61, both hemispheres
318.3
2786
Male, age 76, both hemispheres
318.3
Medial periolivary nuclei nTPM: 323.4
2791
Male, age 74, right hemisphere
443.7
2063
Male, age 76, both hemispheres
357.3
2171
Female, age 85, both hemispheres
298.7
2081
Male, age 80, both hemispheres
292.6
2458
Female, age 91, both hemispheres
224.9
Motor facial nucleus nTPM: 293.0
2365
Male, age 74, right hemisphere
383.0
2062
Male, age 76, both hemispheres
355.4
2126
Male, age 61, both hemispheres
298.5
2795
Female, age 91, both hemispheres
267.4
2697
Female, age 85, both hemispheres
257.4
2327
Male, age 80, both hemispheres
196.5
Motor trigeminal nucleus nTPM: 277.2
2309
Male, age 76, both hemispheres
328.9
2335
Male, age 61, both hemispheres
301.7
2079
Male, age 80, both hemispheres
263.6
2560
Male, age 74, both hemispheres
257.7
2321
Female, age 91, both hemispheres
234.1
Nuclei of the trapezoid body nTPM: 294.8
1983
Male, age 76, both hemispheres
358.6
2735
Female, age 85, both hemispheres
306.3
2159
Male, age 61, both hemispheres
277.0
2166
Male, age 80, both hemispheres
273.6
2368
Female, age 91, both hemispheres
258.6
Nucleus raphe magnus nTPM: 281.8
2455
Male, age 74, both hemispheres
337.6
2160
Male, age 61, both hemispheres
319.0
2051
Male, age 76, both hemispheres
318.5
2328
Male, age 80, both hemispheres
256.1
2459
Female, age 91, both hemispheres
233.7
2172
Female, age 85, both hemispheres
225.7
Paramedian reticular nucleus nTPM: 356.0
2057
Male, age 80, both hemispheres
397.7
2052
Male, age 76, both hemispheres
350.6
2050
Female, age 85, both hemispheres
346.5
2313
Male, age 61, both hemispheres
329.2
Pedunculopontine tegmental nucleus nTPM: 366.5
2334
Male, age 80, both hemispheres
383.3
2338
Male, age 61, both hemispheres
361.5
1921
Female, age 85, both hemispheres
354.7
Pontine nuclei nTPM: 314.6
1863
Male, age 55, unknown
373.7
2109
Female, age 72, unknown
352.2
2454
Male, age 74, left hemisphere
335.9
2727
Male, age 61, right hemisphere
315.0
1968
Male, age 76, left hemisphere
306.8
2115
Male, age 80, left hemisphere
296.6
2319
Female, age 91, both hemispheres
276.7
2787
Female, age 85, both hemispheres
259.8
Pontine raphe nucleus nTPM: 339.1
2853
Male, age 76, midline
360.8
2122
Female, age 85, midline
317.4
Posteroventral cochlear nucleus nTPM: 342.1
2341
Male, age 80, both hemispheres
373.1
2752
Female, age 85, both hemispheres
359.2
2070
Male, age 76, both hemispheres
334.5
2371
Male, age 61, both hemispheres
330.0
2135
Female, age 91, both hemispheres
313.9
Principal sensory trigeminal nucleus nTPM: 299.9
2324
Male, age 76, both hemispheres
350.4
2158
Male, age 61, both hemispheres
301.1
2008
Male, age 80, left hemisphere
283.1
2367
Female, age 91, left hemisphere
264.7
Reticular pontine nucleus, caudal nTPM: 279.5
2092
Male, age 76, both hemispheres
365.0
2559
Male, age 74, both hemispheres
302.9
2457
Female, age 91, both hemispheres
239.4
2332
Male, age 80, right hemisphere
210.7
Reticular pontine nucleus, oral nTPM: 352.5
1939
Male, age 80, both hemispheres
404.6
2361
Male, age 74, both hemispheres
396.1
2167
Male, age 76, both hemispheres
357.7
2012
Female, age 85, both hemispheres
354.8
2366
Female, age 91, both hemispheres
249.2
Reticulotegmental nucleus nTPM: 291.9
2325
Male, age 76, both hemispheres
324.5
2333
Male, age 80, both hemispheres
302.7
2322
Female, age 91, both hemispheres
283.7
2452
Male, age 74, both hemispheres
256.9
Spinal trigeminal nucleus, oral nTPM: 302.6
2737
Female, age 85, both hemispheres
318.6
2164
Male, age 80, both hemispheres
298.3
1978
Male, age 76, both hemispheres
290.8
Subcoeruleus area nTPM: 330.8
2369
Female, age 85, left hemisphere
438.0
1958
Male, age 80, both hemispheres
341.0
2451
Male, age 74, both hemispheres
302.2
2323
Female, age 91, left hemisphere
301.7
2089
Male, age 76, left hemisphere
271.0
Superior olive nTPM: 314.2
2364
Male, age 74, right hemisphere
467.4
1875
Female, age 85, both hemispheres
326.2
2020
Male, age 76, both hemispheres
320.8
2329
Male, age 80, right hemisphere
243.2
2561
Female, age 91, both hemispheres
213.2
Ventral periolivary nuclei nTPM: 287.6
2023
Male, age 76, both hemispheres
362.3
2130
Female, age 85, both hemispheres
304.1
2165
Male, age 80, both hemispheres
282.9
2794
Female, age 91, left hemisphere
201.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 307.3
2359
Male, age 61, both hemispheres
390.2
2840
Female, age 85, both hemispheres
314.0
1959
Male, age 76, both hemispheres
306.7
2161
Male, age 80, both hemispheres
285.1
2449
Male, age 74, both hemispheres
281.9
2456
Female, age 91, both hemispheres
266.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
128.2
Pig sample
Sample description
nTPM
Pons nTPM: 128.2
Samples: 4
Max nTPM: 160.2
Min nTPM: 88.6
Sample A
Female
88.6
Sample B
Female
108.6
Sample C
Male
155.2
Sample D
Male
160.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
