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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
336.7
nTPM
GTEx:
336.7
nTPM
FANTOM5:
330.7
Scaled Tags Per Million
Pig:
21.7
nTPM
Mouse:
355.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
336.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 336.7
Samples: 105
Max nTPM: 581.7
Min nTPM: 223.7
Std nTPM: 68.9
Median nTPM:
490_1
67 years, female
581.7
307_1
66 years, female
563.0
2_1
77 years, female
549.8
495_1
57 years, female
505.6
162_1
79 years, female
477.0
375_1
74 years, female
467.6
347_1
72 years, male
460.6
117_1
61 years, male
438.1
35_1
74 years, female
424.1
237_1
82 years, male
422.4
6_1
73 years, female
419.5
389_1
86 years, female
415.0
145_1
84 years, male
410.1
316_1
62 years, male
395.8
218_1
71 years, female
393.2
126_1
63 years, male
393.1
313_1
79 years, female
392.3
229_1
69 years, female
388.7
311_1
78 years, male
388.1
384_1
83 years, male
388.1
415_1
77 years, female
387.3
414_1
84 years, female
383.0
43_1
64 years, female
379.5
322_1
76 years, male
373.6
319_1
81 years, male
372.9
491_1
89 years, female
372.0
518_1
75 years, female
370.4
4_1
88 years, female
367.7
139_1
64 years, female
365.9
265_1
87 years, male
361.8
526_1
61 years, male
361.5
447_1
81 years, male
361.0
217_1
76 years, male
360.8
499_1
55 years, female
360.0
17_1
71 years, male
359.9
379_1
60 years, male
358.6
480_1
63 years, male
353.6
266_1
85 years, male
346.0
153_1
70 years, female
343.5
18_1
88 years, male
343.4
189_1
76 years, male
342.0
468_1
89 years, male
342.0
42_1
85 years, male
341.2
406_1
79 years, male
341.2
9_1
66 years, female
340.8
81_1
67 years, male
339.2
324_1
76 years, male
336.9
142_1
61 years, female
335.0
377_1
82 years, female
334.4
149_1
88 years, male
333.4
413_1
59 years, female
332.9
246_1
77 years, male
332.0
318_1
68 years, male
330.2
41_1
94 years, female
327.1
396_1
62 years, male
325.2
137_1
83 years, male
324.1
308_1
70 years, female
323.2
315_1
62 years, female
320.5
321_1
62 years, female
318.5
466_1
57 years, female
318.4
115_1
83 years, male
315.8
320_1
89 years, female
315.6
119_1
70 years, female
314.0
404_1
82 years, female
306.9
405_1
91 years, male
306.6
501_1
88 years, male
305.4
293_1
68 years, female
304.3
89_1
63 years, male
303.1
173_1
67 years, male
303.0
348_1
84 years, male
301.7
32_1
67 years, male
300.6
251_1
78 years, male
299.5
376_1
75 years, female
299.3
120_1
70 years, female
298.9
109_1
81 years, female
296.9
243_1
75 years, male
295.5
335_1
73 years, female
293.8
314_1
67 years, male
290.2
503_1
68 years, male
289.6
254_1
77 years, female
287.7
386_1
76 years, male
286.2
172_1
72 years, female
284.0
351_1
91 years, male
282.7
394_1
75 years, female
281.3
452_1
88 years, female
280.5
99_1
64 years, male
280.0
286_1
68 years, female
279.0
354_1
81 years, female
278.5
350_1
84 years, female
274.9
352_1
62 years, male
269.3
425_1
59 years, female
265.6
517_1
88 years, male
261.8
177_1
74 years, male
261.7
264_1
73 years, female
261.4
291_1
76 years, male
258.0
353_1
82 years, female
254.7
288_1
66 years, female
253.6
506_1
65 years, male
253.0
163_1
78 years, male
252.1
317_1
60 years, male
248.0
349_1
83 years, male
241.3
356_1
87 years, female
236.7
292_1
71 years, male
229.9
355_1
70 years, female
229.2
295_1
61 years, female
223.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.