HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:1152.1 nTPM
HPA Brain:538.3 nTPM
GTEx:1152.1 nTPM
FANTOM5:93.0 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:232.0 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051702
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 538.3
Sample id Sample description nTPM
Hippocampus
nTPM: 527.2
1898 Male, age 80, left hemisphere 602.1
2621 Female, age 67, right hemisphere 559.7
2529 Female, age 94, left hemisphere 550.2
2148 Female, age 91, left hemisphere 515.0
1855 Male, age 76, left hemisphere 468.7
1911 Female, age 85, right hemisphere 467.8
Dentate gyrus
nTPM: 516.5
2530 Female, age 94, left hemisphere 634.6
2531 Female, age 67, both hemispheres 537.2
2010 Male, age 76, both hemispheres 532.8
2528 Male, age 74, both hemispheres 511.3
1927 Female, age 91, both hemispheres 459.9
2246 Female, age 85, both hemispheres 423.2
Entorhinal gyrus
nTPM: 538.3
2686 Male, age 75, right hemisphere 623.0
2117 Female, age 91, right hemisphere 602.7
2764 Male, age 80, right hemisphere 542.3
1938 Female, age 85, left hemisphere 504.8
1787 Male, age 76, left hemisphere 501.4
2613 Female, age 94, left hemisphere 455.3
Hippocampus, CA1
nTPM: 496.0
2082 Female, age 91, right hemisphere 566.0
2045 Male, age 76, both hemispheres 514.9
2749 Male, age 80, left hemisphere 497.3
1873 Female, age 85, both hemispheres 461.2
2527 Male, age 74, both hemispheres 440.6
Hippocampus, CA2
nTPM: 497.6
1963 Male, age 80, left hemisphere 660.7
2113 Female, age 91, right hemisphere 520.1
2437 Female, age 94, left hemisphere 464.2
1892 Male, age 76, both hemispheres 451.5
1940 Female, age 85, left hemisphere 446.7
2249 Male, age 74, both hemispheres 442.5
Hippocampus, CA3
nTPM: 475.5
2861 Female, age 67, both hemispheres 557.5
1867 Male, age 76, both hemispheres 519.0
1891 Female, age 85, both hemispheres 463.2
2137 Male, age 80, left hemisphere 451.2
2436 Male, age 74, both hemispheres 445.8
2620 Female, age 94, left hemisphere 415.9
Parahippocampal cortex
nTPM: 448.0
2018 Male, age 76, both hemispheres 595.8
1933 Female, age 85, both hemispheres 502.2
2250 Female, age 67, right hemisphere 480.7
1990 Female, age 91, right hemisphere 454.4
2245 Female, age 91, both hemispheres 452.4
2622 Female, age 67, right hemisphere 429.3
2532 Female, age 72, left hemisphere 415.0
1850 Male, age 80, both hemispheres 413.4
2692 Male, age 74, both hemispheres 411.8
2693 Female, age 94, both hemispheres 325.2
Perirhinal gyrus
nTPM: 437.2
1794 Male, age 80, right hemisphere 467.2
1841 Female, age 85, right hemisphere 458.9
1847 Female, age 91, left hemisphere 448.7
2521 Female, age 94, right hemisphere 412.8
2848 Male, age 76, right hemisphere 398.3
Subiculum
nTPM: 500.0
2042 Male, age 76, both hemispheres 604.5
1977 Female, age 85, both hemispheres 559.6
2729 Female, age 91, right hemisphere 496.2
2619 Male, age 74, both hemispheres 467.5
1901 Male, age 80, both hemispheres 464.1
2438 Female, age 94, left hemisphere 408.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1152.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1152.1
Samples: 197

Max nTPM: 3006.9
Min nTPM: 497.2
Std nTPM: 428.0
Median nTPM: 1055.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3006.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2554.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2553.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2462.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2432.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2430.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2163.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2097.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2074.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1986.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1937.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 93.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 93.0
FF:10169-103B7 60 years, female 115.2
FF:10153-102I9 76 years, female 70.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Subiculum
nTPM: 5.0
Samples: 4

Max nTPM: 6.1
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 5.7
Sample C Male 6.1
Sample D Male 5.6
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.4
Sample A Female 3.4
Sample B Female 3.6
Sample C Male 5.2
Sample D Male 2.4
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 5.8
Sample C Male 8.3
Sample D Male 6.0
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 7.7
Min nTPM: 1.9
Sample A Female 7.7
Sample B Female 5.5
Sample C Male 1.9
Sample D Male 3.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 232.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 226.2
Samples: 4

Max nTPM: 234.9
Min nTPM: 217.9
Sample A Male 230.1
Sample B Male 221.8
Sample C Female 217.9
Sample D Female 234.9
Hippocampal formation
nTPM: 232.1
Samples: 4

Max nTPM: 269.3
Min nTPM: 204.5
Sample A Male 269.3
Sample B Male 237.1
Sample C Female 204.5
Sample D Female 217.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
69028599 Antisense, RP_050316_01_F06, Mouse strain C57BL/6J (56 days, male) 16.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org