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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
689.1
nTPM
FANTOM5:
87.4
Scaled Tags Per Million
Pig:
2.7
nTPM
Allen mouse:
9.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
689.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 624.5
2090
Male, age 80, both hemispheres
732.6
2188
Female, age 91, both hemispheres
642.6
2301
Female, age 85, both hemispheres
564.0
1984
Male, age 76, both hemispheres
558.6
Dorsal cochlear nucleus nTPM: 689.1
2802
Male, age 74, right hemisphere
833.3
2058
Male, age 76, both hemispheres
690.0
2187
Female, age 91, both hemispheres
688.3
2378
Male, age 80, both hemispheres
629.5
2370
Male, age 61, both hemispheres
604.4
Dorsal tegmental nucleus nTPM: 596.6
2326
Male, age 74, both hemispheres
661.5
2083
Male, age 80, both hemispheres
623.9
1936
Male, age 76, left hemisphere
556.2
2358
Male, age 61, both hemispheres
544.9
Dorsolateral tegmental area nTPM: 624.2
2337
Male, age 61, both hemispheres
754.5
2654
Male, age 80, both hemispheres
710.1
2360
Male, age 74, both hemispheres
582.4
2141
Male, age 76, both hemispheres
540.5
2751
Female, age 85, both hemispheres
533.5
Kolliker-Fuse nucleus nTPM: 600.8
2315
Male, age 76, right hemisphere
737.7
2163
Male, age 80, both hemispheres
542.0
2793
Female, age 91, left hemisphere
522.8
Lateral lemniscal nuclei nTPM: 484.3
2746
Female, age 85, left hemisphere
587.3
2320
Female, age 91, left hemisphere
504.2
2169
Male, age 76, both hemispheres
481.5
2453
Male, age 74, right hemisphere
457.4
2036
Male, age 80, both hemispheres
390.9
Lateral parabrachial nucleus nTPM: 643.2
2792
Male, age 76, both hemispheres
700.9
2013
Male, age 80, both hemispheres
683.7
2790
Male, age 61, both hemispheres
601.3
2139
Female, age 85, right hemisphere
586.8
Lateral vestibular nucleus nTPM: 633.1
2311
Male, age 80, both hemispheres
747.6
2184
Male, age 76, both hemispheres
518.6
Locus coeruleus nTPM: 530.9
2162
Male, age 80, both hemispheres
591.7
2123
Female, age 91, both hemispheres
581.8
2317
Female, age 72, unknown
544.2
2014
Male, age 55, unknown
530.1
2720
Male, age 74, both hemispheres
519.6
1980
Male, age 76, both hemispheres
505.5
2788
Male, age 74, unknown
443.3
Medial parabrachial nucleus nTPM: 589.4
2170
Female, age 91, both hemispheres
676.2
2463
Female, age 85, right hemisphere
667.4
2156
Male, age 61, both hemispheres
608.9
2786
Male, age 76, both hemispheres
520.4
2854
Male, age 80, both hemispheres
473.9
Medial periolivary nuclei nTPM: 564.9
2081
Male, age 80, both hemispheres
671.1
2063
Male, age 76, both hemispheres
648.8
2458
Female, age 91, both hemispheres
541.4
2791
Male, age 74, right hemisphere
482.9
2171
Female, age 85, both hemispheres
480.2
Motor facial nucleus nTPM: 542.7
2126
Male, age 61, both hemispheres
696.2
2062
Male, age 76, both hemispheres
652.4
2795
Female, age 91, both hemispheres
540.5
2365
Male, age 74, right hemisphere
497.4
2697
Female, age 85, both hemispheres
456.2
2327
Male, age 80, both hemispheres
413.4
Motor trigeminal nucleus nTPM: 583.4
2335
Male, age 61, both hemispheres
637.8
2560
Male, age 74, both hemispheres
596.4
2321
Female, age 91, both hemispheres
578.0
2309
Male, age 76, both hemispheres
564.3
2079
Male, age 80, both hemispheres
540.7
Nuclei of the trapezoid body nTPM: 561.3
1983
Male, age 76, both hemispheres
709.6
2735
Female, age 85, both hemispheres
555.9
2368
Female, age 91, both hemispheres
530.5
2166
Male, age 80, both hemispheres
524.2
2159
Male, age 61, both hemispheres
486.5
Nucleus raphe magnus nTPM: 499.9
2051
Male, age 76, both hemispheres
590.4
2459
Female, age 91, both hemispheres
544.3
2455
Male, age 74, both hemispheres
490.2
2172
Female, age 85, both hemispheres
477.2
2328
Male, age 80, both hemispheres
453.7
2160
Male, age 61, both hemispheres
443.6
Paramedian reticular nucleus nTPM: 559.8
2057
Male, age 80, both hemispheres
640.8
2052
Male, age 76, both hemispheres
570.2
2313
Male, age 61, both hemispheres
533.3
2050
Female, age 85, both hemispheres
494.8
Pedunculopontine tegmental nucleus nTPM: 532.2
2338
Male, age 61, both hemispheres
600.9
2334
Male, age 80, both hemispheres
544.7
1921
Female, age 85, both hemispheres
451.2
Pontine nuclei nTPM: 548.6
1968
Male, age 76, left hemisphere
634.9
2115
Male, age 80, left hemisphere
629.9
2319
Female, age 91, both hemispheres
582.6
2787
Female, age 85, both hemispheres
544.7
2109
Female, age 72, unknown
533.7
1863
Male, age 55, unknown
521.3
2727
Male, age 61, right hemisphere
476.9
2454
Male, age 74, left hemisphere
464.9
Pontine raphe nucleus nTPM: 546.5
2853
Male, age 76, midline
568.5
2122
Female, age 85, midline
524.5
Posteroventral cochlear nucleus nTPM: 683.5
2135
Female, age 91, both hemispheres
831.8
2341
Male, age 80, both hemispheres
716.7
2371
Male, age 61, both hemispheres
689.4
2752
Female, age 85, both hemispheres
593.5
2070
Male, age 76, both hemispheres
586.2
Principal sensory trigeminal nucleus nTPM: 497.3
2367
Female, age 91, left hemisphere
528.9
2158
Male, age 61, both hemispheres
517.3
2008
Male, age 80, left hemisphere
473.6
2324
Male, age 76, both hemispheres
469.4
Reticular pontine nucleus, caudal nTPM: 602.5
2457
Female, age 91, both hemispheres
697.4
2559
Male, age 74, both hemispheres
634.8
2092
Male, age 76, both hemispheres
615.8
2332
Male, age 80, right hemisphere
462.1
Reticular pontine nucleus, oral nTPM: 508.8
1939
Male, age 80, both hemispheres
555.1
2167
Male, age 76, both hemispheres
514.1
2366
Female, age 91, both hemispheres
512.0
2361
Male, age 74, both hemispheres
495.9
2012
Female, age 85, both hemispheres
466.9
Reticulotegmental nucleus nTPM: 580.2
2452
Male, age 74, both hemispheres
693.2
2322
Female, age 91, both hemispheres
572.4
2333
Male, age 80, both hemispheres
561.4
2325
Male, age 76, both hemispheres
493.6
Spinal trigeminal nucleus, oral nTPM: 552.9
2164
Male, age 80, both hemispheres
627.8
1978
Male, age 76, both hemispheres
550.6
2737
Female, age 85, both hemispheres
480.4
Subcoeruleus area nTPM: 568.3
2451
Male, age 74, both hemispheres
768.8
2369
Female, age 85, left hemisphere
568.7
2089
Male, age 76, left hemisphere
517.9
2323
Female, age 91, left hemisphere
503.0
1958
Male, age 80, both hemispheres
482.9
Superior olive nTPM: 525.1
2020
Male, age 76, both hemispheres
644.5
2561
Female, age 91, both hemispheres
581.4
2364
Male, age 74, right hemisphere
490.6
2329
Male, age 80, right hemisphere
462.4
1875
Female, age 85, both hemispheres
446.7
Ventral periolivary nuclei nTPM: 524.8
2023
Male, age 76, both hemispheres
670.2
2794
Female, age 91, left hemisphere
503.3
2165
Male, age 80, both hemispheres
485.2
2130
Female, age 85, both hemispheres
440.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 527.8
2161
Male, age 80, both hemispheres
606.4
2456
Female, age 91, both hemispheres
569.1
2359
Male, age 61, both hemispheres
559.5
1959
Male, age 76, both hemispheres
513.6
2449
Male, age 74, both hemispheres
498.6
2840
Female, age 85, both hemispheres
419.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
2.7
Pig sample
Sample description
nTPM
Pons nTPM: 2.7
Samples: 4
Max nTPM: 4.8
Min nTPM: 0.9
Sample A
Female
0.9
Sample B
Female
4.8
Sample C
Male
1.9
Sample D
Male
3.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
