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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
208.4
nTPM
GTEx:
208.4
nTPM
FANTOM5:
134.6
Scaled Tags Per Million
Pig:
1.9
nTPM
Mouse:
303.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
208.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 208.4
Samples: 105
Max nTPM: 481.3
Min nTPM: 43.3
Std nTPM: 107.7
Median nTPM: 0.0
163_1
78 years, male
481.3
351_1
91 years, male
470.1
452_1
88 years, female
456.1
354_1
81 years, female
428.4
321_1
62 years, female
411.1
352_1
62 years, male
399.7
353_1
82 years, female
382.2
356_1
87 years, female
380.7
320_1
89 years, female
368.6
218_1
71 years, female
366.0
349_1
83 years, male
352.2
394_1
75 years, female
349.7
376_1
75 years, female
346.1
251_1
78 years, male
339.9
377_1
82 years, female
338.6
319_1
81 years, male
338.1
350_1
84 years, female
332.8
355_1
70 years, female
327.2
172_1
72 years, female
326.9
386_1
76 years, male
309.9
177_1
74 years, male
306.5
379_1
60 years, male
292.7
389_1
86 years, female
291.3
506_1
65 years, male
289.2
295_1
61 years, female
284.0
6_1
73 years, female
281.3
237_1
82 years, male
274.7
503_1
68 years, male
272.3
243_1
75 years, male
268.3
447_1
81 years, male
262.6
189_1
76 years, male
262.0
347_1
72 years, male
259.3
425_1
59 years, female
259.0
292_1
71 years, male
257.1
322_1
76 years, male
255.2
293_1
68 years, female
252.7
264_1
73 years, female
252.4
375_1
74 years, female
251.2
318_1
68 years, male
250.6
384_1
83 years, male
240.6
173_1
67 years, male
237.4
405_1
91 years, male
236.9
517_1
88 years, male
233.6
335_1
73 years, female
232.0
254_1
77 years, female
229.4
526_1
61 years, male
225.6
286_1
68 years, female
218.4
406_1
79 years, male
216.4
99_1
64 years, male
212.4
404_1
82 years, female
212.3
4_1
88 years, female
211.1
115_1
83 years, male
210.5
480_1
63 years, male
205.4
348_1
84 years, male
199.9
396_1
62 years, male
199.2
17_1
71 years, male
198.2
2_1
77 years, female
197.2
316_1
62 years, male
193.1
317_1
60 years, male
190.7
120_1
70 years, female
173.2
145_1
84 years, male
168.8
41_1
94 years, female
161.8
153_1
70 years, female
160.2
265_1
87 years, male
154.5
311_1
78 years, male
154.5
109_1
81 years, female
152.7
18_1
88 years, male
151.0
246_1
77 years, male
147.2
217_1
76 years, male
144.5
229_1
69 years, female
140.1
314_1
67 years, male
136.2
126_1
63 years, male
134.5
291_1
76 years, male
133.3
491_1
89 years, female
133.2
9_1
66 years, female
133.0
288_1
66 years, female
132.7
518_1
75 years, female
130.9
137_1
83 years, male
125.6
35_1
74 years, female
122.7
42_1
85 years, male
122.5
313_1
79 years, female
118.7
266_1
85 years, male
114.3
490_1
67 years, female
105.2
307_1
66 years, female
103.6
415_1
77 years, female
100.4
466_1
57 years, female
99.1
81_1
67 years, male
97.6
324_1
76 years, male
94.3
468_1
89 years, male
93.3
413_1
59 years, female
84.0
139_1
64 years, female
83.1
117_1
61 years, male
80.2
499_1
55 years, female
78.4
142_1
61 years, female
70.5
162_1
79 years, female
69.8
315_1
62 years, female
63.3
119_1
70 years, female
62.9
32_1
67 years, male
62.3
149_1
88 years, male
62.3
43_1
64 years, female
55.4
308_1
70 years, female
55.1
89_1
63 years, male
55.0
414_1
84 years, female
49.7
501_1
88 years, male
43.9
495_1
57 years, female
43.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.