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BLZF1
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In atlas
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  • BLZF1
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BLZF1
Gene descriptioni

Full gene name according to HGNC.

Basic leucine zipper nuclear factor 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Testis - Unknown function (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

0.23
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Detected in all
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Golgi apparatus In addition localized to the Nucleoplasm
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
Off
Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Testis - Unknown function

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 84 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
PRKAB2 Physical association High 0.84 126
SMAD3 Physical association High 0.81 52
CINP Physical association High 0.78 32
LMO1 Physical association High 0.78 88
RAB2A Physical association High 0.78 15
ZBTB24 Physical association High 0.78 52
BEX2 Physical association High 0.72 67
CHCHD3 Physical association High 0.72 37
FHL2 Physical association High 0.72 96
GEM Physical association High 0.72 88
IQUB Physical association High 0.72 56
KLHL38 Physical association High 0.72 72
RAB2B Physical association High 0.72 11
RAB39A Physical association High 0.72 5
SCNM1 Physical association High 0.72 148
TBC1D7 Physical association High 0.72 22
BCL6 Physical association High 0.68 40
OAZ3 Physical association High 0.67 8
ZNF410 Physical association High 0.67 10
HRAS Physical association High 0.66 87
AQP1 Physical association Medium 0.56 106
BAG3 Physical association Medium 0.56 58
BAG4 Physical association Medium 0.56 60
CARD9 Physical association Medium 0.56 52
CCDC120 Physical association Medium 0.56 90
CCNH Physical association Medium 0.56 37
CDC37 Physical association Medium 0.56 124
CDK18 Physical association Medium 0.56 45
CFAP206 Physical association Medium 0.56 46
ENKD1 Physical association Medium 0.56 159
ERCC3 Physical association Medium 0.56 14
EXOC8 Physical association Medium 0.56 67
FAM90A1 Physical association Medium 0.56 128
FGFR3 Physical association Medium 0.56 192
FRMD6 Physical association Medium 0.56 12
FRS3 Physical association Medium 0.56 77
GRIN2C Physical association Medium 0.56 58
GSN Physical association Medium 0.56 126
HOXC8 Physical association Medium 0.56 74
IKZF3 Physical association Medium 0.56 130
INO80B Physical association Medium 0.56 49
KANK2 Physical association Medium 0.56 151
KAT5 Physical association Medium 0.56 180
KCTD9 Physical association Medium 0.56 77
KIF9 Physical association Medium 0.56 42
LGALS14 Physical association Medium 0.56 43
LMO2 Physical association Medium 0.56 61
LNX1 Physical association Medium 0.56 333
MFAP1 Physical association Medium 0.56 79
MISP Physical association Medium 0.56 44
MKRN3 Physical association Medium 0.56 118
MORN3 Physical association Medium 0.56 57
NDEL1 Physical association Medium 0.56 60
NTAQ1 Physical association Medium 0.56 302
PCDHB12 Physical association Medium 0.56 7
PIK3R3 Physical association Medium 0.56 70
PKN1 Physical association Medium 0.56 59
POLR1C Physical association Medium 0.56 87
PRPF18 Physical association Medium 0.56 63
PSMA1 Physical association Medium 0.56 135
RFC5 Physical association Medium 0.56 21
RHOJ Physical association Medium 0.56 16
SPRED1 Physical association Medium 0.56 308
SSX2 Physical association Medium 0.56 9
SSX2B Physical association Medium 0.56 9
SYT17 Physical association Medium 0.56 34
TBC1D22B Physical association Medium 0.56 46
TCAP Physical association Medium 0.56 34
TCF19 Physical association Medium 0.56 12
TEKT4 Physical association Medium 0.56 80
TNS2 Physical association Medium 0.56 70
TRAPPC2L Physical association Medium 0.56 6
TRIM59 Physical association Medium 0.56 15
TSTD2 Physical association Medium 0.56 16
UBQLN1 Physical association Medium 0.56 213
USHBP1 Physical association Medium 0.56 162
VPS28 Physical association Medium 0.56 12
ZBTB16 Physical association Medium 0.56 43
ZGPAT Physical association Medium 0.56 25
ZIC1 Physical association Medium 0.56 55
ZIM2 Physical association Medium 0.56 26
ZNF124 Physical association Medium 0.56 45
ZNF417 Physical association Medium 0.56 140
ZNF76 Physical association Medium 0.56 62
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

BLZF1 is not a metabolic protein

Contact

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


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