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HSF2BP
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Term
Gene name
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Keyword
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Tissue
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Expression
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Category
Cluster
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Cluster
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Number of interactions
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Score
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In atlas
Column


  • SUMMARY

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  • HSF2BP
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HSF2BP
Gene descriptioni

Full gene name according to HGNC.

Heat shock transcription factor 2 binding protein
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Testis - Spermatogenesis (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Tissue enriched (testis)
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

0.88
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Detected in some
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Nucleoplasm In addition localized to the Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
Off
Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Testis - Spermatogenesis

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 223 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
CDC73 Physical association High 0.67 30
ACTN3 Physical association Medium 0.56 38
ANAPC16 Physical association Medium 0.56 3
ANKRD55 Physical association Medium 0.56 17
ARHGAP45 Physical association Medium 0.56 8
ARHGEF3 Physical association Medium 0.56 7
ARHGEF4 Physical association Medium 0.56 1
ARHGEF5 Physical association Medium 0.56 18
ARHGEF6 Physical association Medium 0.56 13
ATOSB Physical association Medium 0.56 50
BARD1 Physical association Medium 0.56 20
BAX Physical association Medium 0.56 12
BAZ2B Physical association Medium 0.56 9
BCAS2 Physical association Medium 0.56 49
BEX2 Physical association Medium 0.56 67
BLK Physical association Medium 0.56 22
BMI1 Physical association Medium 0.56 18
BYSL Physical association Medium 0.56 119
C10orf88 Physical association Medium 0.56 9
C18orf54 Physical association Medium 0.56 7
C1orf35 Physical association Medium 0.56 32
C1orf94 Physical association Medium 0.56 69
C2CD6 Physical association Medium 0.56 44
C4orf46 Physical association Medium 0.56 7
C5orf49 Physical association Medium 0.56 4
C7orf31 Physical association Medium 0.56 15
C9orf24 Physical association Medium 0.56 22
CBX8 Physical association Medium 0.56 78
CCDC113 Physical association Medium 0.56 1
CCDC116 Physical association Medium 0.56 24
CCDC120 Physical association Medium 0.56 90
CCDC13 Physical association Medium 0.56 37
CCDC146 Physical association Medium 0.56 42
CCDC185 Physical association Medium 0.56 34
CDC37 Physical association Medium 0.56 124
CDCA7L Physical association Medium 0.56 52
CDR2L Physical association Medium 0.56 49
CDYL2 Physical association Medium 0.56 6
CEP55 Physical association Medium 0.56 56
CKS1B Physical association Medium 0.56 43
CLIP4 Physical association Medium 0.56 10
CNNM1 Physical association Medium 0.56 3
CNNM3 Physical association Medium 0.56 59
CNOT2 Physical association Medium 0.56 24
COIL Physical association Medium 0.56 35
CTSZ Physical association Medium 0.56 16
CTTNBP2 Physical association Medium 0.56 6
CTTNBP2NL Physical association Medium 0.56 10
CWF19L2 Physical association Medium 0.56 65
DCDC2B Physical association Medium 0.56 10
DMAP1 Physical association Medium 0.56 27
DMRT3 Physical association Medium 0.56 65
DPF2 Physical association Medium 0.56 10
DUSP13 Physical association Medium 0.56 9
EAF1 Physical association Medium 0.56 41
EIF3D Physical association Medium 0.56 27
ELOA2 Physical association Medium 0.56 11
EMD Physical association Medium 0.56 72
ENKD1 Physical association Medium 0.56 159
EPHB3 Physical association Medium 0.56 2
EPM2AIP1 Physical association Medium 0.56 40
FAM110A Physical association Medium 0.56 41
FAM110B Physical association Medium 0.56 3
FAM161B Physical association Medium 0.56 54
FAM228A Physical association Medium 0.56 15
FAM90A1 Physical association Medium 0.56 128
FHL2 Physical association Medium 0.56 96
FHL3 Physical association Medium 0.56 103
FLYWCH1 Physical association Medium 0.56 8
FUT9 Physical association Medium 0.56 3
GAS2L2 Physical association Medium 0.56 29
GAS8 Physical association Medium 0.56 97
GCM2 Physical association Medium 0.56 22
GEM Physical association Medium 0.56 88
GGN Physical association Medium 0.56 14
GNL3L Physical association Medium 0.56 13
GOLGA1 Physical association Medium 0.56 12
GPANK1 Physical association Medium 0.56 65
GPBP1 Physical association Medium 0.56 11
GPKOW Physical association Medium 0.56 40
GPSM3 Physical association Medium 0.56 38
H2AC25 Physical association Medium 0.56 3
HASPIN Physical association Medium 0.56 3
HEXIM2 Physical association Medium 0.56 38
HEY2 Physical association Medium 0.56 17
HNRNPH2 Physical association Medium 0.56 6
HOXB5 Physical association Medium 0.56 47
HOXC8 Physical association Medium 0.56 74
HSF2 Physical association Medium 0.56 8
IER2 Physical association Medium 0.56 2
INO80B Physical association Medium 0.56 49
INPP5J Physical association Medium 0.56 15
INSYN2A Physical association Medium 0.56 2
IPMK Physical association Medium 0.56 1
IQCC Physical association Medium 0.56 3
ITGB3BP Physical association Medium 0.56 28
KANK2 Physical association Medium 0.56 151
KAT5 Physical association Medium 0.56 180
KIAA0408 Physical association Medium 0.56 24
KIF5B Physical association Medium 0.56 17
KIF9 Physical association Medium 0.56 42
KLF4 Physical association Medium 0.56 9
L3MBTL2 Physical association Medium 0.56 36
LAGE3 Physical association Medium 0.56 19
LEP Physical association Medium 0.56 1
LGALS4 Physical association Medium 0.56 6
LMO4 Physical association Medium 0.56 85
LNX1 Physical association Medium 0.56 333
LRRC56 Physical association Medium 0.56 6
LRRN4 Physical association Medium 0.56 5
LUZP4 Physical association Medium 0.56 19
MAGED1 Physical association Medium 0.56 79
MAGOHB Physical association Medium 0.56 56
MARCHF7 Physical association Medium 0.56 5
MFAP1 Physical association Medium 0.56 79
MISP Physical association Medium 0.56 44
MKRN3 Physical association Medium 0.56 118
MVB12A Physical association Medium 0.56 2
MYOZ3 Physical association Medium 0.56 44
NAB2 Physical association Medium 0.56 62
NCK2 Physical association Medium 0.56 113
NFIL3 Physical association Medium 0.56 9
NHSL2 Physical association Medium 0.56 19
NME4 Physical association Medium 0.56 43
NPPA Physical association Medium 0.56 4
NTAQ1 Physical association Medium 0.56 302
NUDT10 Physical association Medium 0.56 6
NXF1 Physical association Medium 0.56 62
ODF3B Physical association Medium 0.56 8
ODF3L2 Physical association Medium 0.56 10
OPTN Physical association Medium 0.56 127
P2RX7 Physical association Medium 0.56 10
PAK6 Physical association Medium 0.56 6
PAPSS2 Physical association Medium 0.56 3
PARD6B Physical association Medium 0.56 19
PDLIM7 Physical association Medium 0.56 31
PICK1 Physical association Medium 0.56 275
PKD2 Physical association Medium 0.56 12
PKN1 Physical association Medium 0.56 59
PNMA5 Physical association Medium 0.56 53
POGZ Physical association Medium 0.56 58
POMC Physical association Medium 0.56 13
PPM1K Physical association Medium 0.56 5
PPP1R18 Physical association Medium 0.56 68
PRPF18 Physical association Medium 0.56 63
PRPF3 Physical association Medium 0.56 35
PRPF31 Physical association Medium 0.56 118
PRR5L Physical association Medium 0.56 13
PSMA1 Physical association Medium 0.56 135
PSTPIP1 Physical association Medium 0.56 42
RAB11FIP2 Physical association Medium 0.56 10
RAB36 Physical association Medium 0.56 1
RAB3IL1 Physical association Medium 0.56 24
RAD51D Physical association Medium 0.56 35
RBM17 Physical association Medium 0.56 21
RBM41 Physical association Medium 0.56 23
RBM48 Physical association Medium 0.56 21
REXO4 Physical association Medium 0.56 3
RIBC1 Physical association Medium 0.56 21
RIN1 Physical association Medium 0.56 38
RNF135 Physical association Medium 0.56 4
RNF169 Physical association Medium 0.56 3
RPS28 Physical association Medium 0.56 9
RTP5 Physical association Medium 0.56 49
SART1 Physical association Medium 0.56 10
SAXO1 Physical association Medium 0.56 39
SCNM1 Physical association Medium 0.56 148
SDCBP Physical association Medium 0.56 240
SELENOV Physical association Medium 0.56 9
SEMA4C Physical association Medium 0.56 14
SEPTIN1 Physical association Medium 0.56 17
SH2D4A Physical association Medium 0.56 63
SHISA6 Physical association Medium 0.56 20
SLAIN1 Physical association Medium 0.56 31
SLC6A1 Physical association Medium 0.56 2
SMARCD1 Physical association Medium 0.56 104
SMG9 Physical association Medium 0.56 32
SNAPC1 Physical association Medium 0.56 5
SNW1 Physical association Medium 0.56 89
SNX18 Physical association Medium 0.56 14
SPATA22 Physical association Medium 0.56 16
SPG7 Physical association Medium 0.56 17
SPRED1 Physical association Medium 0.56 308
SPRY1 Physical association Medium 0.56 59
SYNGAP1 Physical association Medium 0.56 10
TAB2 Physical association Medium 0.56 16
TAGAP Physical association Medium 0.56 1
TASOR2 Physical association Medium 0.56 34
TBC1D1 Physical association Medium 0.56 24
TCEA2 Physical association Medium 0.56 88
TCF19 Physical association Medium 0.56 12
TEPSIN Physical association Medium 0.56 101
TFIP11 Physical association Medium 0.56 179
THAP6 Physical association Medium 0.56 13
TMEFF2 Physical association Medium 0.56 5
TMSB4X Physical association Medium 0.56 10
TNS4 Physical association Medium 0.56 10
TRAF5 Physical association Medium 0.56 35
TSEN15 Physical association Medium 0.56 21
TSGA10IP Physical association Medium 0.56 83
TSHZ3 Physical association Medium 0.56 24
TTC9C Physical association Medium 0.56 14
TULP3 Physical association Medium 0.56 15
UPRT Physical association Medium 0.56 8
VEZF1 Physical association Medium 0.56 40
VPS72 Physical association Medium 0.56 5
WASF1 Physical association Medium 0.56 15
YJU2B Physical association Medium 0.56 19
ZBTB16 Physical association Medium 0.56 43
ZBTB42 Physical association Medium 0.56 38
ZCWPW2 Physical association Medium 0.56 2
ZNF185 Physical association Medium 0.56 5
ZNF417 Physical association Medium 0.56 140
ZNF511 Physical association Medium 0.56 12
ZNF564 Physical association Medium 0.56 30
ZNF581 Physical association Medium 0.56 82
ZNF587 Physical association Medium 0.56 102
ZNF648 Physical association Medium 0.56 50
ZNF688 Physical association Medium 0.56 28
ZNF774 Physical association Medium 0.56 68
ZNF835 Physical association Medium 0.56 54
ZNF84 Physical association Medium 0.56 3
ZNF844 Physical association Medium 0.56 11
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

HSF2BP is not a metabolic protein

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