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KRTAP10-7
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Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
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Category
Cluster
Tissue
Cell type
Enrichment
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Cancer
Category
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Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

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  • KRTAP10-7
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KRTAP10-7
Gene descriptioni

Full gene name according to HGNC.

Keratin associated protein 10-7
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Skin - Keratinization (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Tissue enriched (skin)
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

0.99
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Detected in single
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Not available
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
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Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Skin - Keratinization

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 239 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
LCE1B Physical association High 0.78 69
ZBTB9 Physical association High 0.74 28
ZSCAN26 Physical association High 0.74 15
AP1M1 Physical association High 0.72 67
BUD31 Physical association High 0.72 3
CHRD Physical association High 0.72 40
CLK4 Physical association High 0.72 6
CRCT1 Physical association High 0.72 46
DHX57 Physical association High 0.72 18
FARS2 Physical association High 0.72 56
GABARAPL2 Physical association High 0.72 74
GEM Physical association High 0.72 88
GSTP1 Physical association High 0.72 21
IGSF8 Physical association High 0.72 9
KLHL38 Physical association High 0.72 72
KRTAP10-8 Physical association High 0.72 325
KRTAP10-9 Physical association High 0.72 182
KRTAP12-1 Physical association High 0.72 50
KRTAP5-6 Physical association High 0.72 73
KRTAP9-2 Physical association High 0.72 123
LCE3E Physical association High 0.72 46
LCE4A Physical association High 0.72 63
MAPKBP1 Physical association High 0.72 48
MRGBP Physical association High 0.72 14
NAXD Physical association High 0.72 13
NPDC1 Physical association High 0.72 27
NUFIP2 Physical association High 0.72 58
PIN1 Physical association High 0.72 112
PRKAB2 Physical association High 0.72 126
PTPMT1 Physical association High 0.72 25
SMCP Physical association High 0.72 67
SPRY1 Physical association High 0.72 59
SUV39H1 Physical association High 0.72 52
TOR1A Physical association High 0.72 8
ZNF101 Physical association High 0.72 7
ZNF417 Physical association High 0.72 140
ZNF490 Physical association High 0.72 23
ZNF564 Physical association High 0.72 30
ZNF581 Physical association High 0.72 82
ZNF587 Physical association High 0.72 102
CHRNG Physical association High 0.67 5
RPF1 Physical association High 0.67 1
ZNF223 Physical association High 0.67 6
A2M Physical association Medium 0.56 51
AEN Physical association Medium 0.56 27
ALDH3B1 Physical association Medium 0.56 15
AQP1 Physical association Medium 0.56 106
AVPI1 Physical association Medium 0.56 29
B4GALT7 Physical association Medium 0.56 5
BAHD1 Physical association Medium 0.56 54
BRME1 Physical association Medium 0.56 19
BYSL Physical association Medium 0.56 119
C8orf33 Physical association Medium 0.56 20
CARHSP1 Physical association Medium 0.56 11
CATIP Physical association Medium 0.56 14
CBX2 Physical association Medium 0.56 8
CCDC185 Physical association Medium 0.56 34
CCNG1 Physical association Medium 0.56 14
CDCA7L Physical association Medium 0.56 52
CHIC2 Physical association Medium 0.56 53
CLK1 Physical association Medium 0.56 3
CNNM3 Physical association Medium 0.56 59
COL8A1 Physical association Medium 0.56 51
CRY2 Physical association Medium 0.56 29
CSNK1G1 Physical association Medium 0.56 2
CSNK1G2 Physical association Medium 0.56 4
CTNNBIP1 Physical association Medium 0.56 14
CTRC Physical association Medium 0.56 12
CYSRT1 Physical association Medium 0.56 396
DERL2 Physical association Medium 0.56 8
DMRT3 Physical association Medium 0.56 65
DOCK2 Physical association Medium 0.56 36
E2F6 Physical association Medium 0.56 6
EHHADH Physical association Medium 0.56 94
FAM124B Physical association Medium 0.56 24
FAM161A Physical association Medium 0.56 118
FAM76B Physical association Medium 0.56 8
GABARAPL1 Physical association Medium 0.56 59
GLP1R Physical association Medium 0.56 10
GNE Physical association Medium 0.56 12
GRN Physical association Medium 0.56 216
GUCD1 Physical association Medium 0.56 6
HBZ Physical association Medium 0.56 18
HHEX Physical association Medium 0.56 23
HOXC8 Physical association Medium 0.56 74
HPCAL1 Physical association Medium 0.56 31
HSBP1 Physical association Medium 0.56 15
HSD3B7 Physical association Medium 0.56 42
HTT Physical association Medium 0.56 665
ING5 Physical association Medium 0.56 21
INPP5D Physical association Medium 0.56 9
IQUB Physical association Medium 0.56 56
ITGB5 Physical association Medium 0.56 20
KRT20 Physical association Medium 0.56 32
KRT83 Physical association Medium 0.56 31
KRTAP10-5 Physical association Medium 0.56 115
KRTAP12-3 Physical association Medium 0.56 117
KRTAP26-1 Physical association Medium 0.56 73
KRTAP4-2 Physical association Medium 0.56 102
KRTAP4-5 Physical association Medium 0.56 54
KRTAP5-11 Physical association Medium 0.56 49
KRTAP5-2 Physical association Medium 0.56 38
KRTAP5-9 Physical association Medium 0.56 166
KRTAP9-3 Physical association Medium 0.56 103
KRTAP9-8 Physical association Medium 0.56 72
LCE1A Physical association Medium 0.56 59
LCE1D Physical association Medium 0.56 47
LCE1F Physical association Medium 0.56 61
LCE2A Physical association Medium 0.56 43
LCE2B Physical association Medium 0.56 55
LCE2C Physical association Medium 0.56 71
LCE3A Physical association Medium 0.56 54
LCE3B Physical association Medium 0.56 34
LCE3C Physical association Medium 0.56 46
LCE3D Physical association Medium 0.56 44
LCE5A Physical association Medium 0.56 53
LMNA Physical association Medium 0.56 53
LMO2 Physical association Medium 0.56 61
LRCH4 Physical association Medium 0.56 14
MCRS1 Physical association Medium 0.56 97
MOBP Physical association Medium 0.56 5
MXD3 Physical association Medium 0.56 10
MYPOP Physical association Medium 0.56 33
NAA10 Physical association Medium 0.56 41
NECTIN2 Physical association Medium 0.56 10
NECTIN3 Physical association Medium 0.56 9
NKD1 Physical association Medium 0.56 11
NOL12 Physical association Medium 0.56 10
NOTCH2NLA Physical association Medium 0.56 190
NPBWR2 Physical association Medium 0.56 15
NTAQ1 Physical association Medium 0.56 302
NUBP2 Physical association Medium 0.56 10
OTX1 Physical association Medium 0.56 118
P2RY6 Physical association Medium 0.56 15
PCED1A Physical association Medium 0.56 3
PCSK5 Physical association Medium 0.56 10
PDIA5 Physical association Medium 0.56 2
PDLIM5 Physical association Medium 0.56 9
PFKL Physical association Medium 0.56 4
PGAP6 Physical association Medium 0.56 9
PRM2 Physical association Medium 0.56 3
PRR13 Physical association Medium 0.56 37
PRR35 Physical association Medium 0.56 57
PTGDS Physical association Medium 0.56 10
PVR Physical association Medium 0.56 52
R3HDM2 Physical association Medium 0.56 15
RNF175 Physical association Medium 0.56 1
RPL11 Physical association Medium 0.56 8
RPL36AL Physical association Medium 0.56 1
RPS28 Physical association Medium 0.56 9
RPUSD3 Physical association Medium 0.56 4
RSPO2 Physical association Medium 0.56 4
RTN4RL1 Physical association Medium 0.56 5
RWDD2B Physical association Medium 0.56 9
SCNM1 Physical association Medium 0.56 148
SDCBP Physical association Medium 0.56 240
SHFL Physical association Medium 0.56 26
SLC23A1 Physical association Medium 0.56 10
SLC25A48 Physical association Medium 0.56 4
SLC6A20 Physical association Medium 0.56 8
SMCO4 Physical association Medium 0.56 51
SPACA9 Physical association Medium 0.56 7
SPG7 Physical association Medium 0.56 17
SPRED1 Physical association Medium 0.56 308
SSX2IP Physical association Medium 0.56 78
STK16 Physical association Medium 0.56 66
TCEA2 Physical association Medium 0.56 88
TCEANC Physical association Medium 0.56 24
TEDC2 Physical association Medium 0.56 6
TFAP2D Physical association Medium 0.56 48
THAP1 Physical association Medium 0.56 81
THAP6 Physical association Medium 0.56 13
TLE5 Physical association Medium 0.56 105
TMA16 Physical association Medium 0.56 6
TNS2 Physical association Medium 0.56 70
TRIM42 Physical association Medium 0.56 112
TTPA Physical association Medium 0.56 36
TULP3 Physical association Medium 0.56 15
TYRO3 Physical association Medium 0.56 13
UCP2 Physical association Medium 0.56 1
UXT Physical association Medium 0.56 21
VASN Physical association Medium 0.56 42
VTI1B Physical association Medium 0.56 26
WNT11 Physical association Medium 0.56 17
ZBTB24 Physical association Medium 0.56 52
ZBTB48 Physical association Medium 0.56 23
ZFP41 Physical association Medium 0.56 6
ZIM2 Physical association Medium 0.56 26
ZNF124 Physical association Medium 0.56 45
ZNF133 Physical association Medium 0.56 3
ZNF138 Physical association Medium 0.56 16
ZNF169 Physical association Medium 0.56 5
ZNF175 Physical association Medium 0.56 4
ZNF180 Physical association Medium 0.56 3
ZNF20 Physical association Medium 0.56 43
ZNF256 Physical association Medium 0.56 1
ZNF26 Physical association Medium 0.56 4
ZNF260 Physical association Medium 0.56 3
ZNF264 Physical association Medium 0.56 14
ZNF266 Physical association Medium 0.56 8
ZNF32 Physical association Medium 0.56 9
ZNF320 Physical association Medium 0.56 2
ZNF329 Physical association Medium 0.56 21
ZNF337 Physical association Medium 0.56 8
ZNF408 Physical association Medium 0.56 51
ZNF41 Physical association Medium 0.56 2
ZNF414 Physical association Medium 0.56 42
ZNF418 Physical association Medium 0.56 2
ZNF419 Physical association Medium 0.56 3
ZNF420 Physical association Medium 0.56 7
ZNF425 Physical association Medium 0.56 1
ZNF433 Physical association Medium 0.56 5
ZNF439 Physical association Medium 0.56 19
ZNF440 Physical association Medium 0.56 26
ZNF491 Physical association Medium 0.56 8
ZNF524 Physical association Medium 0.56 22
ZNF543 Physical association Medium 0.56 3
ZNF555 Physical association Medium 0.56 3
ZNF572 Physical association Medium 0.56 58
ZNF575 Physical association Medium 0.56 22
ZNF578 Physical association Medium 0.56 12
ZNF580 Physical association Medium 0.56 15
ZNF625 Physical association Medium 0.56 4
ZNF667 Physical association Medium 0.56 1
ZNF670 Physical association Medium 0.56 19
ZNF696 Physical association Medium 0.56 30
ZNF707 Physical association Medium 0.56 7
ZNF764 Physical association Medium 0.56 26
ZNF774 Physical association Medium 0.56 68
ZNF778 Physical association Medium 0.56 1
ZNF786 Physical association Medium 0.56 9
ZNF792 Physical association Medium 0.56 46
ZNF837 Physical association Medium 0.56 68
ZNF844 Physical association Medium 0.56 11
ZNF846 Physical association Medium 0.56 1
ZNHIT1 Physical association Medium 0.56 22
ZSCAN10 Physical association Medium 0.56 1
ZSCAN21 Physical association Medium 0.56 22
STAT3 Physical association Medium 0.49 55
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

KRTAP10-7 is not a metabolic protein

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