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GOLGA2
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Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
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Cancer
Category
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Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

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  • TISSUE CELL

  • PATHOLOGY

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  • GOLGA2
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GOLGA2
Gene descriptioni

Full gene name according to HGNC.

Golgin A2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Non-specific - Ribosome (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

0.20
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Detected in all
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Golgi apparatus
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
Off
Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Non-specific - Ribosome

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 349 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
STK25 Physical association High 0.95 10
PRKAB2 Physical association High 0.88 126
CCNH Physical association High 0.87 37
PRPF31 Physical association High 0.86 118
CDC73 Physical association High 0.85 30
BCAS2 Physical association High 0.84 49
RBM17 Physical association High 0.83 21
GSE1 Physical association High 0.83 15
GFAP Physical association High 0.81 147
NCF2 Physical association High 0.81 8
GORASP2 Physical association High 0.8 111
DAXX Physical association High 0.79 78
FAM90A1 Physical association High 0.79 128
LENG1 Physical association High 0.79 63
MORN3 Physical association High 0.79 57
NTAQ1 Physical association High 0.79 302
TCL1A Physical association High 0.79 34
YJU2 Physical association High 0.79 15
ZBTB16 Physical association High 0.79 43
C12orf50 Physical association High 0.78 1
DCTN4 Physical association High 0.78 8
FBXO28 Physical association High 0.78 16
GPKOW Physical association High 0.78 40
KANK2 Physical association High 0.78 151
KRT18 Physical association High 0.78 26
KRT6A Physical association High 0.78 30
RAB2A Physical association High 0.78 15
ZNF414 Physical association High 0.78 42
ZNF774 Physical association High 0.78 68
PPP1R16B Physical association High 0.76 31
STK26 Physical association High 0.76 8
ALKBH3 Physical association High 0.74 5
TCF19 Physical association High 0.74 12
TRIM29 Physical association High 0.74 13
ARL4A Physical association High 0.72 6
ARPC3 Physical association High 0.72 15
BARD1 Physical association High 0.72 20
BYSL Physical association High 0.72 119
C2CD6 Physical association High 0.72 44
CBX8 Physical association High 0.72 78
CCAR1 Physical association High 0.72 3
CCDC87 Physical association High 0.72 7
CDC5L Physical association High 0.72 48
CDK18 Physical association High 0.72 45
CEP57L1 Physical association High 0.72 27
CHCHD2 Physical association High 0.72 24
CINP Physical association High 0.72 32
DDX6 Physical association High 0.72 66
FAM110A Physical association High 0.72 41
FAM50B Physical association High 0.72 39
GCC1 Physical association High 0.72 37
GEM Physical association High 0.72 88
GLYCTK Physical association High 0.72 48
INPP5J Physical association High 0.72 15
KRT1 Physical association High 0.72 32
LCP2 Physical association High 0.72 16
LMO1 Physical association High 0.72 88
LMO4 Physical association High 0.72 85
MAGOH Physical association High 0.72 15
MAGOHB Physical association High 0.72 56
MFAP1 Physical association High 0.72 79
MOS Physical association High 0.72 46
NME7 Physical association High 0.72 62
NOS3 Physical association High 0.72 40
PATL1 Physical association High 0.72 15
PIN1 Physical association High 0.72 112
PKN1 Physical association High 0.72 59
PPP1R18 Physical association High 0.72 68
PQBP1 Physical association High 0.72 9
PSMA1 Physical association High 0.72 135
RAB2B Physical association High 0.72 11
RAB39A Physical association High 0.72 5
RBM41 Physical association High 0.72 23
RNF135 Physical association High 0.72 4
RSPH14 Physical association High 0.72 36
SH2D4A Physical association High 0.72 63
SLU7 Physical association High 0.72 22
SMARCE1 Physical association High 0.72 56
SNW1 Physical association High 0.72 89
TCEA2 Physical association High 0.72 88
TEAD4 Physical association High 0.72 30
TFAP4 Physical association High 0.72 13
TPX2 Physical association High 0.72 8
TSSK3 Physical association High 0.72 51
USP2 Physical association High 0.72 78
WASHC3 Physical association High 0.72 44
ZMAT2 Physical association High 0.72 44
ZNF417 Physical association High 0.72 140
BCL6 Physical association High 0.7 40
FAM161A Physical association High 0.7 118
SCNM1 Physical association High 0.7 148
TBC1D22B Physical association High 0.7 46
TRAF4 Physical association High 0.7 73
UTP14C Physical association High 0.7 17
RHPN1 Physical association High 0.67 15
C1orf35 Physical association High 0.67 32
DCX Physical association High 0.67 13
GATA2 Physical association High 0.67 24
GPANK1 Physical association High 0.67 65
ITPKB Physical association High 0.67 8
KANSL1 Physical association High 0.67 22
NEBL Physical association High 0.67 28
RAB39B Physical association High 0.67 4
RITA1 Physical association High 0.67 3
SCAF8 Physical association High 0.67 2
SCEL Physical association High 0.67 6
SH3RF2 Physical association High 0.67 9
SLX9 Physical association High 0.67 3
SPATA2 Physical association High 0.67 17
THAP7 Physical association High 0.67 47
UBE2U Physical association High 0.67 3
ZNF488 Physical association High 0.67 10
CIC Physical association High 0.66 4
UBE2I Physical association High 0.66 40
ADAP1 Physical association Medium 0.56 5
AFF4 Physical association Medium 0.56 8
ALKBH2 Physical association Medium 0.56 2
AQP1 Physical association Medium 0.56 106
ARFIP2 Physical association Medium 0.56 42
ARHGAP45 Physical association Medium 0.56 8
ARHGEF6 Physical association Medium 0.56 13
ATOSA Physical association Medium 0.56 5
ATOSB Physical association Medium 0.56 50
ATP5PO Physical association Medium 0.56 18
ATP6V1G1 Physical association Medium 0.56 8
AXIN1 Physical association Medium 0.56 40
BAHD1 Physical association Medium 0.56 54
BAZ2B Physical association Medium 0.56 9
C1orf109 Physical association Medium 0.56 121
CAB39 Physical association Medium 0.56 10
CAPN7 Physical association Medium 0.56 12
CCDC120 Physical association Medium 0.56 90
CCDC13 Physical association Medium 0.56 37
CCDC150 Physical association Medium 0.56 3
CCDC17 Physical association Medium 0.56 3
CCDC185 Physical association Medium 0.56 34
CCDC198 Physical association Medium 0.56 16
CCDC70 Physical association Medium 0.56 11
CCNC Physical association Medium 0.56 69
CDC20B Physical association Medium 0.56 11
CDC37 Physical association Medium 0.56 124
CDC7 Physical association Medium 0.56 21
CDCA7L Physical association Medium 0.56 52
CDKL3 Physical association Medium 0.56 22
CDKL5 Physical association Medium 0.56 2
CDKN1A Physical association Medium 0.56 49
CENPP Physical association Medium 0.56 20
CEP95 Physical association Medium 0.56 13
CHCHD3 Physical association Medium 0.56 37
CLIP3 Physical association Medium 0.56 5
CORO1A Physical association Medium 0.56 6
COX5B Physical association Medium 0.56 29
CRACR2A Physical association Medium 0.56 31
CUL5 Physical association Medium 0.56 17
CWF19L2 Physical association Medium 0.56 65
CYB5R2 Physical association Medium 0.56 6
DEUP1 Physical association Medium 0.56 34
DLGAP3 Physical association Medium 0.56 6
DLGAP5 Physical association Medium 0.56 3
DMTN Physical association Medium 0.56 3
DTX2 Physical association Medium 0.56 95
EFHC1 Physical association Medium 0.56 61
EIF3G Physical association Medium 0.56 12
ENKD1 Physical association Medium 0.56 159
ENPP7 Physical association Medium 0.56 4
ESCO2 Physical association Medium 0.56 3
EXOC8 Physical association Medium 0.56 67
EXOSC5 Physical association Medium 0.56 42
FAM124B Physical association Medium 0.56 24
FAM161B Physical association Medium 0.56 54
FIP1L1 Physical association Medium 0.56 5
FNDC11 Physical association Medium 0.56 37
FOXC2 Physical association Medium 0.56 7
GADD45GIP1 Physical association Medium 0.56 55
GAS2L2 Physical association Medium 0.56 29
GAS8 Physical association Medium 0.56 97
GATAD2A Physical association Medium 0.56 5
GATAD2B Physical association Medium 0.56 19
GGN Physical association Medium 0.56 14
GNG5 Physical association Medium 0.56 6
GNL3L Physical association Medium 0.56 13
GRB14 Physical association Medium 0.56 3
GTPBP10 Physical association Medium 0.56 3
HAUS1 Physical association Medium 0.56 83
HDAC4 Physical association Medium 0.56 22
HGS Physical association Medium 0.56 177
HOXB5 Physical association Medium 0.56 47
HOXB9 Physical association Medium 0.56 42
HTT Physical association Medium 0.56 665
HYCC2 Physical association Medium 0.56 4
HYLS1 Physical association Medium 0.56 1
IFT20 Physical association Medium 0.56 24
IFT27 Physical association Medium 0.56 16
IQUB Physical association Medium 0.56 56
ISCU Physical association Medium 0.56 16
ITGB5 Physical association Medium 0.56 20
KAT5 Physical association Medium 0.56 180
KDM1A Physical association Medium 0.56 86
KIFC3 Physical association Medium 0.56 70
KRT6B Physical association Medium 0.56 20
KRT6C Physical association Medium 0.56 21
KRT75 Physical association Medium 0.56 103
L3MBTL2 Physical association Medium 0.56 36
LASP1 Physical association Medium 0.56 21
LCOR Physical association Medium 0.56 5
LGALS3 Physical association Medium 0.56 13
LIN7A Physical association Medium 0.56 12
LINGO1 Physical association Medium 0.56 11
LMNB2 Physical association Medium 0.56 22
LMO2 Physical association Medium 0.56 61
LYPLA1 Physical association Medium 0.56 2
LYSMD1 Physical association Medium 0.56 10
MAB21L2 Physical association Medium 0.56 11
MBD3 Physical association Medium 0.56 14
MCM7 Physical association Medium 0.56 25
MCRS1 Physical association Medium 0.56 97
MISP Physical association Medium 0.56 44
MNAT1 Physical association Medium 0.56 5
MORF4L1 Physical association Medium 0.56 28
MORF4L2 Physical association Medium 0.56 42
MSRB3 Physical association Medium 0.56 4
MTFR2 Physical association Medium 0.56 6
NDC80 Physical association Medium 0.56 42
NDEL1 Physical association Medium 0.56 60
NEFL Physical association Medium 0.56 70
NRIP1 Physical association Medium 0.56 14
NUDT21 Physical association Medium 0.56 20
NXT2 Physical association Medium 0.56 10
ODAD4 Physical association Medium 0.56 7
PARD6B Physical association Medium 0.56 19
PIAS2 Physical association Medium 0.56 16
PID1 Physical association Medium 0.56 9
PIK3R2 Physical association Medium 0.56 21
PIMREG Physical association Medium 0.56 18
PITX1 Physical association Medium 0.56 50
PKN3 Physical association Medium 0.56 8
PKP4 Physical association Medium 0.56 8
POLR3C Physical association Medium 0.56 29
POU4F3 Physical association Medium 0.56 5
PPP1R26 Physical association Medium 0.56 5
PRAM1 Physical association Medium 0.56 17
PRKAA1 Physical association Medium 0.56 33
PRKAA2 Physical association Medium 0.56 78
PRPF18 Physical association Medium 0.56 63
PRPF3 Physical association Medium 0.56 35
PSMA4 Physical association Medium 0.56 13
PTPN21 Physical association Medium 0.56 17
RAD18 Physical association Medium 0.56 12
RAMAC Physical association Medium 0.56 37
RANBP3L Physical association Medium 0.56 3
RBM22 Physical association Medium 0.56 6
RBM25 Physical association Medium 0.56 2
RCL1 Physical association Medium 0.56 1
RCOR3 Physical association Medium 0.56 24
RGS8 Physical association Medium 0.56 1
RHNO1 Physical association Medium 0.56 7
RHOJ Physical association Medium 0.56 16
RIBC1 Physical association Medium 0.56 21
RIN1 Physical association Medium 0.56 38
RNF169 Physical association Medium 0.56 3
RTP5 Physical association Medium 0.56 49
SAMD4A Physical association Medium 0.56 3
SAP30BP Physical association Medium 0.56 7
SECISBP2 Physical association Medium 0.56 2
SELENOV Physical association Medium 0.56 9
SHC3 Physical association Medium 0.56 31
SHISA6 Physical association Medium 0.56 20
SMCP Physical association Medium 0.56 67
SMG9 Physical association Medium 0.56 32
SNAP47 Physical association Medium 0.56 21
SNF8 Physical association Medium 0.56 19
SNRPB2 Physical association Medium 0.56 16
SNX18 Physical association Medium 0.56 14
SPATA18 Physical association Medium 0.56 10
SPATA22 Physical association Medium 0.56 16
SPG21 Physical association Medium 0.56 129
STAC Physical association Medium 0.56 15
STAMBPL1 Physical association Medium 0.56 22
SUDS3 Physical association Medium 0.56 4
SYT17 Physical association Medium 0.56 34
TAB2 Physical association Medium 0.56 16
TCEANC Physical association Medium 0.56 24
TEPSIN Physical association Medium 0.56 101
TEX9 Physical association Medium 0.56 6
TLE5 Physical association Medium 0.56 105
TPM1 Physical association Medium 0.56 7
TRIM14 Physical association Medium 0.56 26
TRIM42 Physical association Medium 0.56 112
TSGA10 Physical association Medium 0.56 54
TSGA10IP Physical association Medium 0.56 83
TSHZ2 Physical association Medium 0.56 15
TSHZ3 Physical association Medium 0.56 24
TSSC4 Physical association Medium 0.56 8
TTC23 Physical association Medium 0.56 17
TTC9C Physical association Medium 0.56 14
TTPA Physical association Medium 0.56 36
TXLNA Physical association Medium 0.56 76
TXLNB Physical association Medium 0.56 61
UBE3C Physical association Medium 0.56 1
UBTFL1 Physical association Medium 0.56 22
UTP23 Physical association Medium 0.56 22
VEZF1 Physical association Medium 0.56 40
VPS28 Physical association Medium 0.56 12
VPS37C Physical association Medium 0.56 72
WHRN Physical association Medium 0.56 8
ZBTB4 Physical association Medium 0.56 9
ZBTB42 Physical association Medium 0.56 38
ZFP2 Physical association Medium 0.56 10
ZGPAT Physical association Medium 0.56 25
ZNF124 Physical association Medium 0.56 45
ZNF280C Physical association Medium 0.56 6
ZNF3 Physical association Medium 0.56 11
ZNF35 Physical association Medium 0.56 24
ZNF410 Physical association Medium 0.56 10
ZNF438 Physical association Medium 0.56 50
ZNF48 Physical association Medium 0.56 14
ZNF512B Physical association Medium 0.56 10
ZNF524 Physical association Medium 0.56 22
ZNF572 Physical association Medium 0.56 58
ZNF581 Physical association Medium 0.56 82
ZNF587 Physical association Medium 0.56 102
ZNF648 Physical association Medium 0.56 50
ZNF835 Physical association Medium 0.56 54
ZZZ3 Physical association Medium 0.56 8
AKAP9 Physical association Medium 0.54 5
ZDHHC17 Physical association Medium 0.51 30
ARID5A Physical association Medium 0.49 94
CCDC92 Physical association Medium 0.49 7
CEP55 Physical association Medium 0.49 56
COG6 Physical association Medium 0.49 49
DNM2 Physical association Medium 0.49 25
DVL2 Physical association Medium 0.49 43
EAF2 Physical association Medium 0.49 13
FANCG Physical association Medium 0.49 35
GGA2 Physical association Medium 0.49 12
GMCL1 Physical association Medium 0.49 50
GRAP2 Physical association Medium 0.49 41
IHO1 Physical association Medium 0.49 62
IKZF3 Physical association Medium 0.49 130
NDUFA5 Physical association Medium 0.49 9
SH3GLB2 Physical association Medium 0.49 19
STN1 Physical association Medium 0.49 16
SUPT5H Physical association Medium 0.49 8
TDP2 Physical association Medium 0.49 6
TFIP11 Physical association Medium 0.49 179
TRAF1 Physical association Medium 0.49 166
TRAF5 Physical association Medium 0.49 35
UBE2H Physical association Medium 0.49 9
XIAP Physical association Medium 0.49 42
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

GOLGA2 is not a metabolic protein

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The Human Protein Atlas project is funded
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